RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 WDR63Q8IWG1 891 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 HORMAD2Q8N7B1 307 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 SYT2Q8N9I0 419 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 SLC44A5Q8NCS7 719 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 HUS1BQ8NHY5 278 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 GABPB2Q8TAK5 448 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZKSCAN4Q969J2 545 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 ELMOD3Q96FG2 381 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 SLC41A2Q96JW4 573 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 TTC14Q96N46 770 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 APOL6Q9BWW8 343 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 SEMA4CQ9C0C4 833 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 B3GNT4Q9C0J1 378 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 OR10A4Q9H209 315 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 OSGEPL1Q9H4B0 414 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 PLK3Q9H4B4 646 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 KLHL31Q9H511 634 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZCCHC17Q9NP64 241 aaKnown RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 SETD4Q9NVD3 440 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 WSB2Q9NYS7 404 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 CPSF2Q9P2I0 782 aaKnown RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZHX1Q9UKY1 873 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 MAGED1Q9Y5V3 778 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 GAGE12JA6NER3 117 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 PAPSS1O43252 624 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 TLX3O43711 291 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 MITFO75030 526 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 CNOT3O75175 753 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 TPPPO94811 219 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 CLDN7O95471 211 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 RPN1P04843 607 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 IL7RP16871 459 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 EEF1DP29692 281 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 STAT2P52630 851 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 PNLIPRP2P54317 469 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 PROK1P58294 105 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 MRPS5P82675 430 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 NHLH1Q02575 133 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 ITGADQ13349 1161 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 LPIN1Q14693 890 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 SMTNL2Q2TAL5 461 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 DCAF6Q58WW2 860 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 SGO1Q5FBB7 561 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 TCP11X2Q5H9J9 407 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 C6orf10Q5SRN2 563 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 PRAMEF19Q5SWL8 479 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 KRT79Q5XKE5 535 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 CES5AQ6NT32 575 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 CRELD2Q6UXH1 353 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNF782Q6ZMW2 699 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNF66Q6ZN08 573 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNF793Q6ZN11 406 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 NOXA1Q86UR1 476 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 CAMK1DQ8IU85 385 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 SFTPA2Q8IWL1 248 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 SLC35F3Q8IY50 421 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 PARP16Q8N5Y8 322 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 BOLLQ8N9W6 283 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 TMEM163Q8TC26 289 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 NELL1Q92832 810 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 LRRC59Q96AG4 307 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 EME1Q96AY2 570 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 MOAP1Q96BY2 351 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 HARBI1Q96MB7 349 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 SIGLEC11Q96RL6 698 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 SRSF8Q9BRL6 282 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 IFIH1Q9BYX4 1025 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 TASP1Q9H6P5 420 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 CCDC177Q9NQR7 707 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 PDGFCQ9NRA1 345 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 PSD3Q9NYI0 1048 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 TAB2Q9NYJ8 693 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 CWC15Q9P013 229 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 EXO1Q9UQ84 846 aaKnown RBP5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 DMRT1Q9Y5R6 373 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 CEPT1Q9Y6K0 416 aa5.46□□□□□ -1.54
HMGB1P46-201ENST00000520062 BCAR3O75815 825 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 TUBBP07437 444 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 TFPIP10646 304 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 MYF6P23409 242 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 ATP5F1P24539 256 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 ID2Q02363 134 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 COL10A1Q03692 680 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 CAPSQ13938 189 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 ARHGEF6Q15052 776 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 SOWAHAQ2M3V2 549 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 CDONQ4KMG0 1287 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 ASPHD1Q5U4P2 390 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 HEPHL1Q6MZM0 1159 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNF788Q6ZQV5 615 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 TSPAN33Q86UF1 283 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 EPHX4Q8IUS5 362 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 MCEMP1Q8IX19 187 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 FAM217AQ8IXS0 508 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZBTB2Q8N680 514 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 TEX45Q8NA69 505 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 POGLUT1Q8NBL1 392 aa5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 RRNAD1Q96FB5 475 aaKnown RBP5.45□□□□□ -1.54
HMGB1P46-201ENST00000520062 VCPIP1Q96JH7 1222 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms