RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 PDHXO00330 501 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 IGLV3-25P01717 112 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 ATP6V1B2P21281 511 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 BDNFP23560 247 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 CDH15P55291 814 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 IQSEC1Q6DN90 963 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 FAM45BPQ6NSW5 357 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 LARP4Q71RC2 724 aaKnown RBP eCLIP16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 GPR142Q7Z601 462 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 LDB1Q86U70 411 aaPredicted RBP16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 RETREG3Q86VR2 466 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 TMEM86AQ8N2M4 240 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 SCAMP5Q8TAC9 235 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 NPLOC4Q8TAT6 608 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 FAM45AQ8TCE6 357 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 PPWD1Q96BP3 646 aaKnown RBP16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 RSL24D1Q9UHA3 163 aaKnown RBP16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 CDH9Q9ULB4 789 aa16.64■□□□□ 0.25
PCDHGA11-202ENST00000518882 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 CCL22O00626 93 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 MSI1O43347 362 aaKnown RBP16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 PAGE1O75459 146 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 SRP72O76094 671 aaKnown RBP16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 PGFP49763 221 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 EMP3P54852 163 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 NHSL2Q5HYW2 709 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 CCDC126Q96EE4 140 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 GAD1Q99259 594 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 HAUS8Q9BT25 410 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 ALG9Q9H6U8 611 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 TIMMDC1Q9NPL8 285 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 SFMBT1Q9UHJ3 866 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 PTPRDP23468 1912 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 GRIA3P42263 894 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 LEPRP48357 1165 aaKnown RBP16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 CRYBB1P53674 252 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 CDKN2DP55273 166 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 WNT3AP56704 352 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 YBX1P67809 324 aaKnown RBP16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 PRKCQQ04759 706 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 SAMD4BQ5PRF9 694 aaKnown RBP16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 HECTD2Q5U5R9 776 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 MANEALQ5VSG8 457 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 KRT80Q6KB66 452 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 KIAA0408Q6ZU52 694 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 AFAP1L2Q8N4X5 818 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 FIBCD1Q8N539 461 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 OR13J1Q8NGT2 312 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 LPPQ93052 612 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 ANKRD60Q9BZ19 345 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 TMLHEQ9NVH6 421 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 MPP6Q9NZW5 540 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 MYRFQ9Y2G1 1151 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 PTGDR2Q9Y5Y4 395 aa16.63■□□□□ 0.25
PCDHGA11-202ENST00000518882 IRAK2O43187 625 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 HOXC13P31276 330 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 NME5P56597 212 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 ACAP2Q15057 778 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 SLC14A2Q15849 920 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 GPR158Q5T848 1215 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 IL31Q6EBC2 164 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 KLC3Q6P597 504 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 ZBTB49Q6ZSB9 765 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 PIM3Q86V86 326 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 DHFR2Q86XF0 187 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 IRGQQ8WZA9 623 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 PBXIP1Q96AQ6 731 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 RMND5BQ96G75 393 aaPredicted RBP16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 PNPLA3Q9NST1 481 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 GIMAP2Q9UG22 337 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 CASTOR2A6NHX0 329 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 FAM155AB1AL88 458 aaPredicted RBP16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 AKAP10O43572 662 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 SUPT7LO94864 414 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 RBP1P09455 135 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 UGT1A6P19224 532 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 IMPDH1P20839 514 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 GPX3P22352 226 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 CLCN5P51795 746 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 GALNT1Q10472 559 aaPredicted RBP16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 GRB14Q14449 540 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 IHHQ14623 411 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 MYBPC3Q14896 1274 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 UGT3A2Q3SY77 523 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 TIGD5Q53EQ6 642 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 ZNF678Q5SXM1 525 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 KDELC1Q6UW63 502 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 ANKFN1Q8N957 763 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 FAM47BQ8NA70 645 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 OR2T34Q8NGX1 318 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 OR2T3Q8NH03 318 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 RIN3Q8TB24 985 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 FCRL2Q96LA5 508 aaPredicted RBP16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 PRKD2Q9BZL6 878 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 IL1RL2Q9HB29 575 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 MRGBPQ9NV56 204 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 IRAK4Q9NWZ3 460 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 THEGQ9P2T0 379 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 NUDT5Q9UKK9 219 aa16.62■□□□□ 0.25
PCDHGA11-202ENST00000518882 NLRC5Q86WI3 1866 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms