RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 FOXP3Q9BZS1 431 aa18.51■□□□□ 0.55
SPOP-220ENST00000515508 LRRN3Q9H3W5 708 aa18.51■□□□□ 0.55
SPOP-220ENST00000515508 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
SPOP-220ENST00000515508 APPL1Q9UKG1 709 aa18.51■□□□□ 0.55
SPOP-220ENST00000515508 UNC13CQ8NB66 2214 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 EFSO43281 561 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 NOBOXO60393 691 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 TNFP01375 233 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 PNLIPP16233 465 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 GLB1P16278 677 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 RGRP47804 291 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 TPI1P60174 286 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 CERCAMQ5T4B2 595 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 OGFOD3Q6PK18 319 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 CCNJLQ8IV13 435 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 PLA2G15Q8NCC3 412 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 OR1E3Q8WZA6 343 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 ECHDC3Q96DC8 303 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 ATP13A3Q9H7F0 1226 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 FGF22Q9HCT0 170 aa18.5■□□□□ 0.55
SPOP-220ENST00000515508 TMEM202A6NGA9 273 aa18.49■□□□□ 0.55
SPOP-220ENST00000515508 HOXC4P09017 264 aaPredicted RBP18.49■□□□□ 0.55
SPOP-220ENST00000515508 HGFP14210 728 aa18.49■□□□□ 0.55
SPOP-220ENST00000515508 SERPINA4P29622 427 aa18.49■□□□□ 0.55
SPOP-220ENST00000515508 OGDHQ02218 1023 aa18.49■□□□□ 0.55
SPOP-220ENST00000515508 OR56A4Q8NGH8 313 aa18.49■□□□□ 0.55
SPOP-220ENST00000515508 FUBP1Q96AE4 644 aaKnown RBP18.49■□□□□ 0.55
SPOP-220ENST00000515508 AGPAT1Q99943 283 aa18.49■□□□□ 0.55
SPOP-220ENST00000515508 SEPT11Q9NVA2 429 aaKnown RBP18.49■□□□□ 0.55
SPOP-220ENST00000515508 MAST4O15021 2626 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 ARHGAP42A6NI28 874 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 LGALS16A8MUM7 142 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 EIF3CLB5ME19 914 aaKnown RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 CACNB4O00305 520 aaPredicted RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 TNFRSF10CO14798 259 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 NVLO15381 856 aaKnown RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 RECQL5O94762 991 aaPredicted RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 PRKCGP05129 697 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 GM2AP17900 193 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 TRIM23P36406 574 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 PAPOLAP51003 745 aaKnown RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 COPB1P53618 953 aaKnown RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 ZFP36L1Q07352 338 aaKnown RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 AFMIDQ63HM1 303 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 LIPIQ6XZB0 460 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 SPRED1Q7Z699 444 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 SRLQ86TD4 932 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 JAMLQ86YT9 394 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 MCOLN2Q8IZK6 566 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 TSEN2Q8NCE0 465 aaKnown RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 NEK11Q8NG66 645 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 TMEM159Q96B96 161 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 CELF6Q96J87 481 aaKnown RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 EIF3CQ99613 913 aaKnown RBP18.48■□□□□ 0.55
SPOP-220ENST00000515508 SLC39A8Q9C0K1 460 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 FANCLQ9NW38 375 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 AP4E1Q9UPM8 1137 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 LOXL2Q9Y4K0 774 aa18.48■□□□□ 0.55
SPOP-220ENST00000515508 TLN1Q9Y490 2541 aaKnown RBP18.47■□□□□ 0.55
SPOP-220ENST00000515508 ARHGEF17Q96PE2 2063 aaPredicted RBP18.47■□□□□ 0.55
SPOP-220ENST00000515508 TRAFD1O14545 582 aaPredicted RBP18.47■□□□□ 0.55
SPOP-220ENST00000515508 PALMO75781 387 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 ELFN1P0C7U0 828 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 JMJD7P0C870 316 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 LIPCP11150 499 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 DESP17661 470 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 KELP23276 732 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 HLTFQ14527 1009 aaKnown RBP eCLIP18.47■□□□□ 0.55
SPOP-220ENST00000515508 C14orf28Q4W4Y0 310 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 DCUN1D2Q6PH85 259 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 DPPA4Q7L190 304 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 TAF8Q7Z7C8 310 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 SPOCK2Q92563 424 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 ERGIC2Q96RQ1 377 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 MRPL40Q9NQ50 206 aaKnown RBP18.47■□□□□ 0.55
SPOP-220ENST00000515508 GPATCH2LQ9NWQ4 482 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 PISDQ9UG56 409 aa18.47■□□□□ 0.55
SPOP-220ENST00000515508 LIMA1Q9UHB6 759 aaKnown RBP18.47■□□□□ 0.55
SPOP-220ENST00000515508 EEF2KO00418 725 aaKnown RBP18.46■□□□□ 0.55
SPOP-220ENST00000515508 NUDT21O43809 227 aaKnown RBP18.46■□□□□ 0.55
SPOP-220ENST00000515508 BCL2L1Q07817 233 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 NSUN2Q08J23 767 aaKnown RBP eCLIP18.46■□□□□ 0.55
SPOP-220ENST00000515508 RFTN1Q14699 578 aaPredicted RBP18.46■□□□□ 0.55
SPOP-220ENST00000515508 TGIF1Q15583 401 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 CA9Q16790 459 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 ACAD10Q6JQN1 1059 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 RBM43Q6ZSC3 357 aaKnown RBP18.46■□□□□ 0.55
SPOP-220ENST00000515508 SLITRK4Q8IW52 837 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 SFTPA2Q8IWL1 248 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 ARHGAP12Q8IWW6 846 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 FAM46DQ8NEK8 389 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 COL26A1Q96A83 441 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 SGF29Q96ES7 293 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 PCMTD1Q96MG8 357 aaPredicted RBP18.46■□□□□ 0.55
SPOP-220ENST00000515508 SYT11Q9BT88 431 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 CINPQ9BW66 212 aaPredicted RBP18.46■□□□□ 0.55
SPOP-220ENST00000515508 TMEM168Q9H0V1 697 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 WDR26Q9H7D7 661 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 RNF215Q9Y6U7 377 aa18.46■□□□□ 0.55
SPOP-220ENST00000515508 UBR5O95071 2799 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms