RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 FGF14Q92915 247 aa16.07■□□□□ 0.16
NUP54-214ENST00000514307 HDAC10Q969S8 669 aa16.07■□□□□ 0.16
NUP54-214ENST00000514307 CENPTQ96BT3 561 aa16.07■□□□□ 0.16
NUP54-214ENST00000514307 ZNF778Q96MU6 729 aa16.07■□□□□ 0.16
NUP54-214ENST00000514307 SELENOSQ9BQE4 189 aa16.07■□□□□ 0.16
NUP54-214ENST00000514307 CAPS2Q9BXY5 557 aa16.07■□□□□ 0.16
NUP54-214ENST00000514307 GPR63Q9BZJ6 419 aa16.07■□□□□ 0.16
NUP54-214ENST00000514307 NLE1Q9NVX2 485 aaPredicted RBP16.07■□□□□ 0.16
NUP54-214ENST00000514307 PKP3Q9Y446 797 aa16.07■□□□□ 0.16
NUP54-214ENST00000514307 NYNRINQ9P2P1 1898 aaKnown RBP16.06■□□□□ 0.16
NUP54-214ENST00000514307 TRIM49D1C9J1S8 452 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 TRIM24O15164 1050 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 KRT4P19013 534 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 SLC8A1P32418 973 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 MDH1P40925 334 aaKnown RBP16.06■□□□□ 0.16
NUP54-214ENST00000514307 TNFRSF4P43489 277 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 CCT5P48643 541 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 FNDC3BQ53EP0 1204 aaKnown RBP16.06■□□□□ 0.16
NUP54-214ENST00000514307 BRAT1Q6PJG6 821 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 DPY19L3Q6ZPD9 716 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 CNTN4Q8IWV2 1026 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 UNC5BQ8IZJ1 945 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 FRS2Q8WU20 508 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 CYB5D2Q8WUJ1 264 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 NSMCE3Q96MG7 304 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 MFSD1Q9H3U5 465 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 TRPV5Q9NQA5 729 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 PPIL1Q9Y3C6 166 aa16.06■□□□□ 0.16
NUP54-214ENST00000514307 EDDM13A0A1B0GTR0 161 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 A0A1W2PPM1 405 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 CCDC78A2IDD5 438 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 OTOL1A6NHN0 477 aaPredicted RBP16.05■□□□□ 0.16
NUP54-214ENST00000514307 FAM47DPA6NHR8 397 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 TTC34A8MYJ7 566 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 PRPF4O43172 522 aaKnown RBP eCLIP16.05■□□□□ 0.16
NUP54-214ENST00000514307 PIAS1O75925 651 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 PPARGP37231 505 aaPredicted RBP16.05■□□□□ 0.16
NUP54-214ENST00000514307 ATP1A2P50993 1020 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 GYS2P54840 703 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 SMAD4Q13485 552 aaKnown RBP16.05■□□□□ 0.16
NUP54-214ENST00000514307 HTR4Q13639 388 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 SKIV2LQ15477 1246 aaKnown RBP16.05■□□□□ 0.16
NUP54-214ENST00000514307 GAB4Q2WGN9 574 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 MROH9Q5TGP6 573 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 Q6ZVU0 165 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 USP45Q70EL2 814 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 GALNT7Q86SF2 657 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 DSG4Q86SJ6 1040 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 C12orf40Q86WS4 652 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 DEFB123Q8N688 67 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 TERB1Q8NA31 727 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 GPR150Q8NGU9 434 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 OR6K2Q8NGY2 324 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 OR4L1Q8NH43 312 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 SCRN2Q96FV2 425 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 CDKN2AIPNLQ96HQ2 116 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 SGSM3Q96HU1 749 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 CABS1Q96KC9 395 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 TCF12Q99081 682 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 TTC1Q99614 292 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 ZDHHC6Q9H6R6 413 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 INTS9Q9NV88 658 aaKnown RBP16.05■□□□□ 0.16
NUP54-214ENST00000514307 PSD3Q9NYI0 1048 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 GTSE1Q9NYZ3 720 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 SLC2A6Q9UGQ3 507 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 IL36AQ9UHA7 158 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 FBXO5Q9UKT4 447 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 VPS9D1Q9Y2B5 631 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 ARL5AQ9Y689 179 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 NUMBLQ9Y6R0 609 aa16.05■□□□□ 0.16
NUP54-214ENST00000514307 A0A0J9YYE9 177 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 PRRT4C9JH25 899 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 CD3EAPO15446 510 aaKnown RBP16.04■□□□□ 0.16
NUP54-214ENST00000514307 UGT1A9O60656 530 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 KAT7O95251 611 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 PIGNO95427 931 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 TRBC1P01850 177 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 PRNPP04156 253 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 MPOP05164 745 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 ITGA2BP08514 1039 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 PIRTP0C851 137 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 CYP2A6P11509 494 aaPredicted RBP16.04■□□□□ 0.16
NUP54-214ENST00000514307 XPAP23025 273 aaPredicted RBP16.04■□□□□ 0.16
NUP54-214ENST00000514307 HMGCLP35914 325 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 OPRD1P41143 372 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 KDSRQ06136 332 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 PTPRNQ16849 979 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 FASTKD1Q53R41 847 aaKnown RBP16.04■□□□□ 0.16
NUP54-214ENST00000514307 ARSIQ5FYB1 569 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 ZDHHC20Q5W0Z9 365 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 GPR153Q6NV75 609 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 TPRG1Q6ZUI0 275 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 OTUD6BQ8N6M0 293 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 TMIEQ8NEW7 156 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 MDGA1Q8NFP4 955 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 TTC8Q8TAM2 541 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 SORCS1Q8WY21 1168 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 ECHDC3Q96DC8 303 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 TBATAQ96M53 351 aa16.04■□□□□ 0.16
NUP54-214ENST00000514307 AGAP2Q99490 1192 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms