RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 MSH2P43246 934 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 IDH3AP50213 366 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 SLC18A1P54219 525 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 SESN2P58004 480 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-230ENST00000511944 DSC2Q02487 901 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 ACVR1Q04771 509 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 MGAT5Q09328 741 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 KIAA0930Q6ICG6 404 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-230ENST00000511944 CASC4Q6P4E1 433 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 PKN3Q6P5Z2 889 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 NCEH1Q6PIU2 408 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 KDM7AQ6ZMT4 941 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 TPGS1Q6ZTW0 290 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 KIAA0408Q6ZU52 694 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 GALNT7Q86SF2 657 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 TREML1Q86YW5 311 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 IGDCC3Q8IVU1 814 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 SUGP1Q8IWZ8 645 aaKnown RBP9.17□□□□□ -0.94
NR1I3-230ENST00000511944 CPA6Q8N4T0 437 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 SMRP1Q8NCR6 262 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 IPMKQ8NFU5 416 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 OR2W6PQ8NHA6 318 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 WFDC5Q8TCV5 224 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 NXPE3Q969Y0 559 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 ALKBH8Q96BT7 664 aaKnown RBP9.17□□□□□ -0.94
NR1I3-230ENST00000511944 SGSM3Q96HU1 749 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 LRIG1Q96JA1 1093 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 PAFAH2Q99487 392 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 FAM83CQ9BQN1 747 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 TDRD1Q9BXT4 1180 aaKnown RBP9.17□□□□□ -0.94
NR1I3-230ENST00000511944 CPEB1Q9BZB8 566 aaKnown RBP9.17□□□□□ -0.94
NR1I3-230ENST00000511944 SMG9Q9H0W8 520 aaKnown RBP9.17□□□□□ -0.94
NR1I3-230ENST00000511944 TRABDQ9H4I3 376 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 PLAC1Q9HBJ0 212 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 SYBUQ9NX95 663 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 CLEC1BQ9P126 229 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 INTS6Q9UL03 887 aaKnown RBP9.17□□□□□ -0.94
NR1I3-230ENST00000511944 TCAF1Q9Y4C2 921 aa9.17□□□□□ -0.94
NR1I3-230ENST00000511944 CHD7Q9P2D1 2997 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 IQANK1A0A1B0GTG1 560 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 ZCWPW2A0A1B0GU75 182 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 MROH6A6NGR9 719 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 HEPACAM2A8MVW5 462 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 WASH3PC4AMC7 463 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 NPC1O15118 1278 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 MUSKO15146 869 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 SNAP91O60641 907 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 TBX10O75333 385 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 PMPCBO75439 489 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 BANF1O75531 89 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 KRT37O76014 449 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 KRT38O76015 456 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 CRTAMO95727 393 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 ATP5BP06576 529 aaKnown RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 ATXN1LP0C7T5 689 aaKnown RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 LAMP2P13473 410 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 PSMC3P17980 439 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 NR1D1P20393 614 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 NFKBIAP25963 317 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 GCAP28676 217 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 CD70P32970 193 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 NNMTP40261 264 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 GRIA4P48058 902 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 POLD2P49005 469 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 DGKGP49619 791 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 CSE1LP55060 971 aaKnown RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 SNRPD1P62314 119 aaKnown RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 ECT2LQ008S8 904 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 RAD51Q06609 339 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 ITKQ08881 620 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 MSLNQ13421 630 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 CBX2Q14781 532 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 UGP2Q16851 508 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 LONRF1Q17RB8 773 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 KCTD19Q17RG1 926 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 KBTBD12Q3ZCT8 623 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 FUT11Q495W5 492 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 ANKRD20A4Q4UJ75 823 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 C22orf39Q6P5X5 142 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 GET4Q7L5D6 327 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 SRLQ86TD4 932 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 CNTN4Q8IWV2 1026 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 APCDD1Q8J025 514 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 MPP5Q8N3R9 675 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 SH2D3CQ8N5H7 860 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 OR2AP1Q8NGE2 309 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 CALML6Q8TD86 181 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 BRSK1Q8TDC3 778 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 HCAR2Q8TDS4 363 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 EPS8L3Q8TE67 593 aaKnown RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 DCAKDQ8WVC6 231 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 SUSD6Q92537 303 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 ARL8AQ96BM9 186 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 CERS2Q96G23 380 aa9.16□□□□□ -0.94
NR1I3-230ENST00000511944 ZNF641Q96N77 438 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-230ENST00000511944 SLC30A3Q99726 388 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms