RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 LHX3Q9UBR4 397 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SLC25A13Q9UJS0 675 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 MTF2Q9Y483 593 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 TTLL3Q9Y4R7 772 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 IKBKGQ9Y6K9 419 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 FANCMQ8IYD8 2048 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 MED19A0JLT2 244 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 TMEM8BA6NDV4 472 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 NEDD8-MDP1E9PL57 170 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 SIN3BO75182 1162 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 RPP40O75818 363 aaKnown RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 IGSF6O95976 241 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 MT-CYBP00156 380 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 INHBAP08476 426 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 MGAT1P26572 445 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 HLA-FP30511 346 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 SSTR1P30872 391 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 HADHAP40939 763 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 GRIA1P42261 906 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 MSH2P43246 934 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 SLC18A1P54219 525 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 SESN2P58004 480 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 DSC2Q02487 901 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 ACVR1Q04771 509 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 MGAT5Q09328 741 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 GRM2Q14416 872 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 ST3GAL2Q16842 350 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 HSF5Q4G112 596 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 USP39Q53GS9 565 aaKnown RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 PPM1JQ5JR12 505 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 KIAA0930Q6ICG6 404 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 CASC4Q6P4E1 433 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 PKN3Q6P5Z2 889 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 NCEH1Q6PIU2 408 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 KDM7AQ6ZMT4 941 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 TPGS1Q6ZTW0 290 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 KIAA0408Q6ZU52 694 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 GALNT7Q86SF2 657 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 IGDCC3Q8IVU1 814 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 CPA6Q8N4T0 437 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 IPMKQ8NFU5 416 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 OR2W6PQ8NHA6 318 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 WFDC5Q8TCV5 224 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 GAB3Q8WWW8 586 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 ALKBH8Q96BT7 664 aaKnown RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 SGSM3Q96HU1 749 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 LRIG1Q96JA1 1093 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 PAFAH2Q99487 392 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 FAM83CQ9BQN1 747 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 TDRD1Q9BXT4 1180 aaKnown RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 CPEB1Q9BZB8 566 aaKnown RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 SMG9Q9H0W8 520 aaKnown RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 TRABDQ9H4I3 376 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 PLAC1Q9HBJ0 212 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 SCUBE2Q9NQ36 999 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 SYBUQ9NX95 663 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 INTS6Q9UL03 887 aaKnown RBP9.17□□□□□ -0.94
NR1I3-228ENST00000511676 TCAF1Q9Y4C2 921 aa9.17□□□□□ -0.94
NR1I3-228ENST00000511676 VPS13AQ96RL7 3174 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 IQANK1A0A1B0GTG1 560 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 ZCWPW2A0A1B0GU75 182 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 MROH6A6NGR9 719 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-228ENST00000511676 CHURC1-FNTBB4DL54 471 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 WASH3PC4AMC7 463 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 NPC1O15118 1278 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 MUSKO15146 869 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-228ENST00000511676 ATP9BO43861 1147 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 SNAP91O60641 907 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 PMPCBO75439 489 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 BANF1O75531 89 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 KRT37O76014 449 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 KRT38O76015 456 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 CRTAMO95727 393 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 ATP5BP06576 529 aaKnown RBP9.16□□□□□ -0.94
NR1I3-228ENST00000511676 ATXN1LP0C7T5 689 aaKnown RBP9.16□□□□□ -0.94
NR1I3-228ENST00000511676 NR1D1P20393 614 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 NFKBIAP25963 317 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 GCAP28676 217 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 CTHP32929 405 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 CD70P32970 193 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 NNMTP40261 264 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 GRIA4P48058 902 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 POLD2P49005 469 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 DGKGP49619 791 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 CSE1LP55060 971 aaKnown RBP9.16□□□□□ -0.94
NR1I3-228ENST00000511676 SNRPD1P62314 119 aaKnown RBP9.16□□□□□ -0.94
NR1I3-228ENST00000511676 ECT2LQ008S8 904 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 RAD51Q06609 339 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 ITKQ08881 620 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 MSLNQ13421 630 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-228ENST00000511676 FZD5Q13467 585 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 RUNX3Q13761 415 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 UGP2Q16851 508 aa9.16□□□□□ -0.94
NR1I3-228ENST00000511676 LONRF1Q17RB8 773 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms