RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MFSD7Q6UXD7 560 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 PGAP1Q75T13 922 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 ANKRD52Q8NB46 1076 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 PLOD2O00469 737 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 AVILO75366 819 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 BORAQ6PGQ7 559 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 LRRC55Q6ZSA7 311 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 SPATA20Q8TB22 786 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 EPS8L1Q8TE68 723 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 SNX8Q9Y5X2 465 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 NPHP4O75161 1426 aaPredicted RBP8.4□□□□□ -1.06
HTT-208ENST00000510626 NKRFO15226 690 aaKnown RBP eCLIP8.4□□□□□ -1.06
HTT-208ENST00000510626 OR56A5P0C7T3 313 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 RBM34P42696 430 aaKnown RBP8.4□□□□□ -1.06
HTT-208ENST00000510626 FGD3Q5JSP0 725 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 LMBRD2Q68DH5 695 aaPredicted RBP8.4□□□□□ -1.06
HTT-208ENST00000510626 CYP2R1Q6VVX0 501 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 OAFQ86UD1 273 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 TMEM86AQ8N2M4 240 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 XKR8Q9H6D3 395 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 C8BP07358 591 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 NFICP08651 508 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 MPP5Q8N3R9 675 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 CERS2Q96G23 380 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 MBOAT7Q96N66 472 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 ROGDIQ9GZN7 287 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 PLCL2Q9UPR0 1127 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 AP1M2Q9Y6Q5 423 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 CLRN2A0PK11 232 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 SERPIND1P05546 499 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 RPS9P46781 194 aaKnown RBP8.4□□□□□ -1.06
HTT-208ENST00000510626 ARFIP1P53367 373 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 LRRN4CLQ8ND94 238 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 ADAM33Q9BZ11 813 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 MMP27Q9H306 513 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 STXBP5LQ9Y2K9 1186 aa8.4□□□□□ -1.06
HTT-208ENST00000510626 PRKAR2AP13861 404 aaKnown RBP8.4□□□□□ -1.07
HTT-208ENST00000510626 EPB42P16452 691 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 RPTNQ6XPR3 784 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 KIF18BQ86Y91 864 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 TMEM159Q96B96 161 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 ACOX2Q99424 681 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 GSDMCQ9BYG8 508 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 TTYH1Q9H313 450 aaPredicted RBP8.4□□□□□ -1.07
HTT-208ENST00000510626 MGAT4AQ9UM21 535 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 PDCD5O14737 125 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 GPR182O15218 404 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 HIST1H2ABP04908 130 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 SLC6A2P23975 617 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 PKNOX1P55347 436 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 TMEM132BQ14DG7 1078 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 HIST3H2AQ7L7L0 130 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 HIST1H2ACQ93077 130 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 MARCH7Q9H992 704 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 CCDC177Q9NQR7 707 aaPredicted RBP8.4□□□□□ -1.07
HTT-208ENST00000510626 TCRBV9S1A1TA0A576 114 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 TRUB2O95900 331 aaKnown RBP8.4□□□□□ -1.07
HTT-208ENST00000510626 PRG2P13727 222 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 GRM3Q14832 879 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 FAM131AQ6UXB0 335 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 ZNF410Q86VK4 478 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 C1QTNF7Q9BXJ2 289 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 RAMP2O60895 175 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 GATBO75879 557 aaKnown RBP8.4□□□□□ -1.07
HTT-208ENST00000510626 CLPXO76031 633 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 SEC23AQ15436 765 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 EEPD1Q7L9B9 569 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 ACAT2Q9BWD1 397 aa8.4□□□□□ -1.07
HTT-208ENST00000510626 SDK1Q7Z5N4 2213 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 ZSCAN5CA6NGD5 496 aaPredicted RBP8.39□□□□□ -1.07
HTT-208ENST00000510626 TFECO14948 347 aaPredicted RBP8.39□□□□□ -1.07
HTT-208ENST00000510626 CHRM1P11229 460 aaPredicted RBP8.39□□□□□ -1.07
HTT-208ENST00000510626 SLC7A1P30825 629 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 SNAPC2Q13487 334 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 ANO7Q6IWH7 933 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 ADGRD1Q6QNK2 874 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 TRIM48Q8IWZ4 208 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 LINC00471Q8N535 108 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 ARL10Q8N8L6 244 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 NODALQ96S42 347 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 SLC7A5P2Q9GIP4 190 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 FAM205CA6NFA0 338 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 AQP12BA6NM10 295 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 CCNT2O60583 730 aaKnown RBP8.39□□□□□ -1.07
HTT-208ENST00000510626 AQP12AQ8IXF9 295 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 SLC35C1Q96A29 364 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 NUSAP1Q9BXS6 441 aaKnown RBP8.39□□□□□ -1.07
HTT-208ENST00000510626 ETNK2Q9NVF9 386 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 TRPC4Q9UBN4 977 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
HTT-208ENST00000510626 KDELR1P24390 212 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 GRIA2P42262 883 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 RETSATQ6NUM9 610 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 ITIH5Q86UX2 942 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 PARK7Q99497 189 aaKnown RBP8.39□□□□□ -1.07
HTT-208ENST00000510626 CGREF1Q99674 301 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 MGME1Q9BQP7 344 aa8.39□□□□□ -1.07
HTT-208ENST00000510626 CCDC88AQ3V6T2 1871 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms