RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 BCL2L1Q07817 233 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ELP6Q0PNE2 266 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ZNF235Q14590 738 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 RFTN1Q14699 578 aaPredicted RBP8.81□□□□□ -1
PDLIM5-213ENST00000509357 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
PDLIM5-213ENST00000509357 TMEM259Q4ZIN3 620 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ERAP2Q6P179 960 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 MICALCLQ6ZW33 695 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 GLRX5Q86SX6 157 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 SRLQ86TD4 932 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 SLCO6A1Q86UG4 719 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ZC3H18Q86VM9 953 aaKnown RBP8.81□□□□□ -1
PDLIM5-213ENST00000509357 CCDC50Q8IVM0 306 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 SYCE1Q8N0S2 351 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 BBS5Q8N3I7 341 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ATPAF2Q8N5M1 289 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 GLIS1Q8NBF1 620 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 TMEM145Q8NBT3 493 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 OR13H1Q8NG92 308 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ARRDC2Q8TBH0 407 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 FAM174AQ8TBP5 190 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 SAP25Q8TEE9 199 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ADAMTS14Q8WXS8 1223 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 RBM41Q96IZ5 413 aaKnown RBP8.81□□□□□ -1
PDLIM5-213ENST00000509357 CALR3Q96L12 384 aaKnown RBP8.81□□□□□ -1
PDLIM5-213ENST00000509357 QKIQ96PU8 341 aaKnown RBP eCLIP8.81□□□□□ -11e-9■■■■■ 32.5
PDLIM5-213ENST00000509357 IL12RB2Q99665 862 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 MGME1Q9BQP7 344 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 WRAP53Q9BUR4 548 aaKnown RBP8.81□□□□□ -1
PDLIM5-213ENST00000509357 C1QTNF7Q9BXJ2 289 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 CPEB1Q9BZB8 566 aaKnown RBP8.81□□□□□ -1
PDLIM5-213ENST00000509357 SUV39H2Q9H5I1 410 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 ATP13A3Q9H7F0 1226 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 USP29Q9HBJ7 922 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 DNAJC28Q9NX36 388 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 MSRB2Q9Y3D2 182 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 HS3ST3A1Q9Y663 406 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 CHD8Q9HCK8 2581 aa8.81□□□□□ -1
PDLIM5-213ENST00000509357 MIF4GDA9UHW6 222 aaKnown RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 APOC4-APOC2K7ER74 178 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 PDE2AO00408 941 aaPredicted RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 MATN3O15232 486 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 FFAR2O15552 330 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 NEBLO76041 1014 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 TM7SF2O76062 418 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 PRLP01236 227 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 APOC2P02655 101 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 PRKCGP05129 697 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 TIMP2P16035 220 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 TGM2P21980 687 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 PTPN3P26045 913 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 RBL1P28749 1068 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 SERPINB6P35237 376 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 RABIFP47224 123 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 RXRGP48443 463 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 SCNN1BP51168 640 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 SUOXP51687 545 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 THOP1P52888 689 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 COPS2P61201 443 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 IFI35P80217 286 aaPredicted RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 SEMG2Q02383 582 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 DSC2Q02487 901 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 TRAF2Q12933 501 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 OLIG2Q13516 323 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 PDE1CQ14123 709 aaPredicted RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 RPS6KA1Q15418 735 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 SHBQ15464 509 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 IFI16Q16666 785 aaKnown RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 ODF2Q5BJF6 829 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 ZNF542PQ5EBM4 170 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 TMCO4Q5TGY1 634 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 ALG1LQ6GMV1 187 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 KDM7AQ6ZMT4 941 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 GCNT7Q6ZNI0 430 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 RAB44Q7Z6P3 723 aaPredicted RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 ABI3BPQ7Z7G0 1075 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 SLC13A5Q86YT5 568 aaPredicted RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 DCP2Q8IU60 420 aaKnown RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 CAMK1DQ8IU85 385 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 MAP7D3Q8IWC1 876 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 CCDC13Q8IYE1 715 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 RASGEF1CQ8N431 466 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 TRIM58Q8NG06 486 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 SLC35B2Q8TB61 432 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 BAHD1Q8TBE0 780 aaPredicted RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 FATE1Q969F0 183 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 TADA1Q96BN2 335 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 ZNF641Q96N77 438 aaPredicted RBP8.8□□□□□ -1
PDLIM5-213ENST00000509357 PSKH2Q96QS6 385 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 TUBGCP5Q96RT8 1024 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 C1QTNF2Q9BXJ5 285 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 NOD2Q9HC29 1040 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 NT5MQ9NPB1 228 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 DKK3Q9UBP4 350 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 SEPT3Q9UH03 358 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 DNPEPQ9ULA0 475 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 EFR3BQ9Y2G0 817 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 ATP8A1Q9Y2Q0 1164 aa8.8□□□□□ -1
PDLIM5-213ENST00000509357 PCNX2A6NKB5 2137 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms