RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 EI24O14681 340 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 RGS13O14921 159 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 JRKO75564 520 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 GRAP2O75791 330 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 GFAPP14136 432 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 PTPRAP18433 802 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 IDUAP35475 653 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 GMPRP36959 345 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 OPRL1P41146 370 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 ARCN1P48444 511 aaKnown RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 CDC20Q12834 499 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 GRM3Q14832 879 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 PLEKHG7Q6ZR37 379 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 LINC00523Q86TU6 105 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 LACC1Q8IV20 430 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 CMTR2Q8IYT2 770 aaKnown RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 OR52K1Q8NGK4 314 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 TSPEARQ8WU66 669 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 TRIB2Q92519 343 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 HDAC2Q92769 488 aaKnown RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 KHSRPQ92945 711 aaKnown RBP eCLIP15.96■□□□□ 0.152e-6■■□□□ 12.9
SCLT1-208ENST00000506368 HDAC10Q969S8 669 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 PIWIL1Q96J94 861 aaKnown RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 UBXN10Q96LJ8 280 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 BDH2Q9BUT1 245 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 KLHL25Q9H0H3 589 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 SP140LQ9H930 580 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 ANKHQ9HCJ1 492 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 FBXO8Q9NRD0 319 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 ATP11BQ9Y2G3 1177 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 TYW5A2RUC4 315 aaKnown RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 NCAM2O15394 837 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 PSMD3O43242 534 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 PFKMP08237 780 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 FKBP1BP68106 108 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 BFSP2Q13515 415 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 BAATQ14032 418 aaPredicted RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 PAFAH1B3Q15102 231 aaKnown RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 TAF2Q6P1X5 1199 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 PTRH1Q86Y79 214 aaKnown RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 CNTN4Q8IWV2 1026 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 CENPLQ8N0S6 344 aaPredicted RBP15.96■□□□□ 0.15
SCLT1-208ENST00000506368 CCNYL1Q8N7R7 359 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 C1orf127Q8N9H9 656 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 DNAAF3Q8N9W5 541 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 BEST2Q8NFU1 509 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 SLC10A4Q96EP9 437 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 YME1L1Q96TA2 773 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 LGMNQ99538 433 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 PTPRHQ9HD43 1115 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 HMGXB4Q9UGU5 601 aa15.96■□□□□ 0.15
SCLT1-208ENST00000506368 ISPDA4D126 451 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 UGT2B11O75310 529 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 GMNNO75496 209 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 HPRP00739 348 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 LDLRP01130 860 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 NCAM1P13591 858 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 STMN1P16949 149 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 EEF1B2P24534 225 aaKnown RBP15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ICAM3P32942 547 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 CCR10P46092 362 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ZNF157P51786 506 aaPredicted RBP15.95■□□□□ 0.14
SCLT1-208ENST00000506368 PKDCCQ504Y2 493 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 SLX4IPQ5VYV7 408 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 XAF1Q6GPH4 301 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 CES3Q6UWW8 571 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 USP33Q8TEY7 942 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 KCTD4Q8WVF5 259 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 TRIM54Q9BYV2 358 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ASB7Q9H672 318 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 IARS2Q9NSE4 1012 aaKnown RBP15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ENPP5Q9UJA9 477 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 PARP14Q460N5 1801 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ACKR2O00590 384 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 MSI1O43347 362 aaKnown RBP15.95■□□□□ 0.14
SCLT1-208ENST00000506368 RGS20O76081 388 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 GRK3P35626 688 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 OAZ1P54368 228 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ARPC4P59998 168 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 KYAT1Q16773 422 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 IQSEC1Q6DN90 963 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 PID1Q7Z2X4 250 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ITIH5Q86UX2 942 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 MMAAQ8IVH4 418 aaKnown RBP15.95■□□□□ 0.14
SCLT1-208ENST00000506368 SLC22A9Q8IVM8 553 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 LRRN4Q8WUT4 740 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 TXNDC15Q96J42 360 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 FAM167AQ96KS9 214 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 GPR78Q96P69 363 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ZIC5Q96T25 663 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 VAT1Q99536 393 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 ING2Q9H160 280 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 EHD1Q9H4M9 534 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 RNF146Q9NTX7 359 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 TRHDEQ9UKU6 1024 aa15.95■□□□□ 0.14
SCLT1-208ENST00000506368 CENPBD1B2RD01 187 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 M0QX08 132 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 NME4O00746 187 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 MFSD11O43934 449 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms