RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 OR1A2Q9Y585 309 aa21.17■□□□□ 0.98
SQSTM1-210ENST00000506042 CCP110O43303 1012 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 RNF8O76064 485 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 PIGNO95427 931 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 HOXC4P09017 264 aaPredicted RBP21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 KRT10P13645 584 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 MMP12P39900 470 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 JAM2P57087 298 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 CCL7P80098 99 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 MAP9Q49MG5 647 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 KIAA1614Q5VZ46 1190 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 PRICKLE2Q7Z3G6 844 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 B3GNT4Q9C0J1 378 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 WDR26Q9H7D7 661 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 MOSPD1Q9UJG1 213 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 LOXL2Q9Y4K0 774 aa21.16■□□□□ 0.98
SQSTM1-210ENST00000506042 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.15■□□□□ 0.98
SQSTM1-210ENST00000506042 EEF2KO00418 725 aaKnown RBP21.15■□□□□ 0.98
SQSTM1-210ENST00000506042 NUDT21O43809 227 aaKnown RBP21.15■□□□□ 0.98
SQSTM1-210ENST00000506042 PRAMEF11O60813 436 aa21.15■□□□□ 0.98
SQSTM1-210ENST00000506042 C14orf28Q4W4Y0 310 aa21.15■□□□□ 0.98
SQSTM1-210ENST00000506042 SRLQ86TD4 932 aa21.15■□□□□ 0.98
SQSTM1-210ENST00000506042 COL26A1Q96A83 441 aa21.15■□□□□ 0.98
SQSTM1-210ENST00000506042 FERP16591 822 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 CHRNB2P17787 502 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 CDK11BP21127 795 aaKnown RBP21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 AP1S1P61966 158 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 NSUN2Q08J23 767 aaKnown RBP eCLIP21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 ILF3Q12906 894 aaKnown RBP eCLIP21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 KRT31Q15323 416 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 CYTH1Q15438 398 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 CERCAMQ5T4B2 595 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 PIM3Q86V86 326 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 PYROXD2Q8N2H3 581 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 LZTR1Q8N653 840 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 GPR156Q8NFN8 814 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 NSMCE1Q8WV22 266 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 GSDMCQ9BYG8 508 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 FOXP3Q9BZS1 431 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 CAAP1Q9H8G2 361 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 PHPT1Q9NRX4 125 aaPredicted RBP21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 PARVAQ9NVD7 372 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 LRIT1Q9P2V4 623 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 AP4E1Q9UPM8 1137 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
SQSTM1-210ENST00000506042 A0A1W2PNU3 283 aaPredicted RBP21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 RHPN2P1A8MT19 583 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 RECQL5O94762 991 aaPredicted RBP21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 HSPA9P38646 679 aaKnown RBP21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 ATP1A2P50993 1020 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 PDX1P52945 283 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 PTP4A2Q12974 167 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 ACOX1Q15067 660 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 RAB6CQ53S08 254 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 PHF19Q5T6S3 580 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 MON1BQ7L1V2 547 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 NDUFAF2Q8N183 169 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 Q8N9G6 341 aaPredicted RBP21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 AGPAT1Q99943 283 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 RAB6CQ9H0N0 254 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 NOL6Q9H6R4 1146 aaKnown RBP21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 HAUS2Q9NVX0 235 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 COL27A1Q8IZC6 1860 aaPredicted RBP21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 RP1P56715 2156 aa21.13■□□□□ 0.97
SQSTM1-210ENST00000506042 HELZ2Q9BYK8 2649 aaKnown RBP21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 A0A1W2PQC6 194 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 B4DGG1 531 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 INSIG1O15503 277 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 CPNE6O95741 557 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 CELA2BP08218 269 aaPredicted RBP21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 UBXN1Q04323 297 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 TCEA2Q15560 299 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 OGFOD3Q6PK18 319 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 B3GNT8Q7Z7M8 397 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 CAMK1DQ8IU85 385 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 PDXPQ96GD0 296 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 DPYSL5Q9BPU6 564 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 DHX35Q9H5Z1 703 aaKnown RBP21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 LRRC19Q9H756 370 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 CYP4F12Q9HCS2 524 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 SEPT3Q9UH03 358 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 COL6A6A6NMZ7 2263 aa21.12■□□□□ 0.97
SQSTM1-210ENST00000506042 DFFAO00273 331 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 PRPSAP2O60256 369 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 WISP1O95388 367 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 CYP2A6P11509 494 aaPredicted RBP21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 ITIH2P19823 946 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 PSMA2P25787 234 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 NOP2P46087 812 aaKnown RBP21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 PAPOLAP51003 745 aaKnown RBP21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 IL10RBQ08334 325 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 NFATC3Q12968 1075 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 ZNF235Q14590 738 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 PPP1R15BQ5SWA1 713 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 ERMARDQ5T6L9 678 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 CDKAL1Q5VV42 579 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 SPECC1LQ69YQ0 1117 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 SASS6Q6UVJ0 657 aa21.11■□□□□ 0.97
SQSTM1-210ENST00000506042 DPPA4Q7L190 304 aa21.11■□□□□ 0.97
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