RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TTC27Q6P3X3 843 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 FAM124AQ86V42 546 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 PDIK1LQ8N165 341 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 UBE2J2Q8N2K1 259 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 GPR63Q9BZJ6 419 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 ACTR6Q9GZN1 396 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 TRABDQ9H4I3 376 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 XPNPEP1Q9NQW7 623 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 TBC1D29Q9UFV1 150 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 PCDHGB2Q9Y5G2 931 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 KIDINS220Q9ULH0 1771 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 A0A096LPI6 279 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 PSMD12O00232 456 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 BEST1O76090 585 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 MT-ATP6P00846 226 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 IFNA7P01567 189 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 ERCC1P07992 297 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 UGT1A6P19224 532 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 PVALBP20472 110 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 MSH3P20585 1137 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 DNM2P50570 870 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 MLF1P58340 268 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 KCNAB2Q13303 367 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 ALKBH1Q13686 389 aaKnown RBP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 NCOA4Q13772 614 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 GRK1Q15835 563 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 TMEM26Q6ZUK4 368 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 MAML2Q8IZL2 1156 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 CLYBLQ8N0X4 340 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 EFCAB3Q8N7B9 438 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 CAMKVQ8NCB2 501 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 MTMR14Q8NCE2 650 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 LRRN4CLQ8ND94 238 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 OR5T2Q8NGG2 359 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 SEC14L1Q92503 715 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 TMCO6Q96DC7 493 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 WRNIP1Q96S55 665 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 TARS2Q9BW92 718 aaKnown RBP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 ARHGEF4Q9NR80 690 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 ANKFY1Q9P2R3 1169 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 SEC14L4Q9UDX3 406 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 INTS6Q9UL03 887 aaKnown RBP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 PPP1R3CQ9UQK1 317 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 HRH3Q9Y5N1 445 aa6.28□□□□□ -1.4
CLCN3-204ENST00000504131 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-204ENST00000504131 UTYO14607 1347 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 NPHP3-ACAD11A0A0J9YXS1 232 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 PER1O15534 1290 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 DHX15O43143 795 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 MAGEC1O60732 1142 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 MAFO75444 373 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 PGK2P07205 417 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 BDKRB2P30411 391 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 NCKAP1LP55160 1127 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 PSME3P61289 254 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 VLDLRP98155 873 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 DGCR6Q14129 220 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SLC14A2Q15849 920 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SMTNL2Q2TAL5 461 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 RALGPS1Q5JS13 557 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 KHDRBS2Q5VWX1 349 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ZFP1Q6P2D0 407 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF765Q7L2R6 523 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SSX7Q7RTT5 188 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 MTDHQ86UE4 582 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 RAD51AP1Q96B01 352 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 APOPT1Q96IL0 206 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 MIPEPQ99797 713 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SLC26A1Q9H2B4 701 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 REEP4Q9H6H4 257 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 NOL11Q9H8H0 719 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 IL1RAPQ9NPH3 570 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SAMHD1Q9Y3Z3 626 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 WASH4PA8MWX3 477 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 IRAK2O43187 625 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF14P17017 642 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 PRCPP42785 496 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ATP2C1P98194 919 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 CYP24A1Q07973 514 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SURF1Q15526 300 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 LPCAT4Q643R3 524 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ETV3LQ6ZN32 361 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 C15orf52Q6ZUT6 534 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 PCSK9Q8NBP7 692 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 TRMT10AQ8TBZ6 339 aaKnown RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 FCGR1BQ92637 280 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 RIT2Q99578 217 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 KLC2Q9H0B6 622 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF275Q9NSD4 429 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-204ENST00000504131 FAM86C1Q9NVL1 165 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 LRP2BPQ9P2M1 347 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 HAO1Q9UJM8 370 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 GDAQ9Y2T3 454 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SPATA31E1Q6ZUB1 1445 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 PIK3C2BO00750 1634 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 A8MUA0 341 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 NUAK1O60285 661 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 SUPT7LO94864 414 aa6.27□□□□□ -1.41
CLCN3-204ENST00000504131 RABIFP47224 123 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms