RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 HIDE1A8MVS5 230 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 TMEM114B3SHH9 223 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 CRTAMO95727 393 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 GLUD1P00367 558 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 GJA1P17302 382 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 BMPR1AP36894 532 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 SLC12A2P55011 1212 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 ZBTB16Q05516 673 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 ILF2Q12905 390 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 MPP7Q5T2T1 576 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 LDB1Q86U70 411 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 WDR75Q8IWA0 830 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 BBS7Q8IWZ6 715 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 MRPL43Q8N983 215 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 TDRD5Q8NAT2 981 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 PPP4R1Q8TF05 950 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 SLC22A17Q8WUG5 538 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 RMDN1Q96DB5 314 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 SLC46A2Q9BY10 475 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 NLE1Q9NVX2 485 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 HAO1Q9UJM8 370 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 SH3BP1Q9Y3L3 701 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 PCDHGC4Q9Y5F7 938 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 WISP3O95389 354 aaPredicted RBP21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 GLP2RO95838 553 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 ATP5BP06576 529 aaKnown RBP21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 GLRBP48167 497 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 PRKAA2P54646 552 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 TRAF2Q12933 501 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 TAF1AQ15573 450 aaPredicted RBP21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 HECTD2Q5U5R9 776 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 ALYREFQ86V81 257 aaKnown RBP21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 MFN1Q8IWA4 741 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 SREK1Q8WXA9 508 aaKnown RBP21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 SLC7A6OSQ96CW6 309 aaPredicted RBP21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 PRR11Q96HE9 360 aaPredicted RBP21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 CDKN2AIPNLQ96HQ2 116 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 CORO1BQ9BR76 489 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 GATA5Q9BWX5 397 aaPredicted RBP21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 LRMDAQ9H2I8 198 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 ASAH2Q9NR71 780 aa21.42■■□□□ 1.02
UBE2D3-216ENST00000503742 FCHO1O14526 889 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 CD3EAPO15446 510 aaKnown RBP21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 CBX6O95503 412 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 MYL4P12829 197 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 ALOX15P16050 662 aaPredicted RBP21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 ELF3P78545 371 aaPredicted RBP21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 ICE2Q659A1 982 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 CYB5D1Q6P9G0 228 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 KIF2BQ8N4N8 673 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 MDGA1Q8NFP4 955 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 INPP5DQ92835 1189 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 SCYL1Q96KG9 808 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 GCNAQ96QF7 691 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 STN1Q9H668 368 aaKnown RBP21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 IGSF5Q9NSI5 407 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 XPR1Q9UBH6 696 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 PRKAG2Q9UGJ0 569 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 VWA7Q9Y334 891 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 HELZP42694 1942 aaKnown RBP21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 DOCK6Q96HP0 2047 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 TRAFD1O14545 582 aaPredicted RBP21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 CCL16O15467 120 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 CCR2P41597 374 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 MPPE1Q53F39 396 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 RALGPS1Q5JS13 557 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 LIPMQ5VYY2 423 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 MRNIPQ6NTE8 343 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 PSRC1Q6PGN9 363 aaPredicted RBP21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 TTC7BQ86TV6 843 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 OR4L1Q8NH43 312 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 DDI1Q8WTU0 396 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 HEXDCQ8WVB3 486 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 TSPAN17Q96FV3 270 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 NMUR2Q9GZQ4 415 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 PNPOQ9NVS9 261 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 LNPEPQ9UIQ6 1025 aa21.41■■□□□ 1.02
UBE2D3-216ENST00000503742 ANKRD66B4E2M5 251 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 LEFTY2O00292 366 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 ZNF195O14628 629 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 OGNP20774 298 aaKnown RBP21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 CTNNB1P35222 781 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 CLCN4P51793 760 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 SEMA3AQ14563 771 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 KRT72Q14CN4 511 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 PPM1LQ5SGD2 360 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 PLPP4Q5VZY2 271 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 MAVSQ7Z434 540 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 GLT6D1Q7Z4J2 308 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 APCDD1Q8J025 514 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 LPCAT1Q8NF37 534 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 SPPL3Q8TCT6 385 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 BHMTQ93088 406 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 UBXN10Q96LJ8 280 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 MRPL57Q9BQC6 102 aaKnown RBP21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 EBF4Q9BQW3 602 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 ADGRE3Q9BY15 652 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 CATSPERZQ9NTU4 200 aa21.4■■□□□ 1.02
UBE2D3-216ENST00000503742 ARHGAP26Q9UNA1 814 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms