RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 MKLN1Q9UL63 735 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 CARD8Q9Y2G2 431 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 FAM96BQ9Y3D0 163 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 CAPN7Q9Y6W3 813 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 FSD2A1L4K1 749 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 GAGE12JA6NER3 117 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 HSPB2A8KAH6 182 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 EIF3CLB5ME19 914 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 NPIPB11E5RHQ5 1161 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 H0YGN5 161 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 SEC14L5O43304 696 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 LIASO43766 372 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 TIPRLO75663 272 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 CCNDBP1O95273 360 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 SCGB1D1O95968 90 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 TFP02787 698 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ACADMP11310 421 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 LAMP2P13473 410 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 MAPK4P31152 587 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 BSGP35613 385 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 PBX3P40426 434 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 CXCR3P49682 368 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 HDAC4P56524 1084 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 KRTAP10-12P60413 245 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ARF3P61204 181 aaPredicted RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 OLR1P78380 273 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ARF1P84077 181 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 GRIK3Q13003 919 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ITGADQ13349 1161 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 MAMLD1Q13495 774 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 KEAP1Q14145 624 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 EIF4A2Q14240 407 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 FRG1Q14331 258 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 LPIN1Q14693 890 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 PTGR1Q14914 329 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ARHGEF6Q15052 776 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 MED22Q15528 200 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 HSPB2Q16082 182 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 CCNG2Q16589 344 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 PRTGQ2VWP7 1150 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 WASHC2DQ5SRD0 308 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 PRAMEF19Q5SWL8 479 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ITPRIPL1Q6GPH6 555 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 KLHL24Q6TFL4 600 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 PARM1Q6UWI2 310 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 NEK10Q6ZWH5 1172 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 IKBIPQ70UQ0 350 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 CTU1Q7Z7A3 348 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 NOXA1Q86UR1 476 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 TMPRSS12Q86WS5 348 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 PALB2Q86YC2 1186 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 DENND6AQ8IWF6 608 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 RBFAQ8N0V3 343 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ADSSL1Q8N142 457 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM199Q8N511 208 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ZCCHC9Q8N567 271 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 IQCF1Q8N6M8 205 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 GABPB2Q8TAK5 448 aaPredicted RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 BICD2Q8TD16 824 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 LPAR1Q92633 364 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 GTF3C6Q969F1 213 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 SMARCE1Q969G3 411 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 SLC25A28Q96A46 364 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 INTS12Q96CB8 462 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 PABPC5Q96DU9 382 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 NLRP4Q96MN2 994 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 NEUROD6Q96NK8 337 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 GFM1Q96RP9 751 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 MXRA8Q9BRK3 442 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ITPAQ9BY32 194 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 ISCUQ9H1K1 167 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 KLHL31Q9H511 634 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 EIF2B3Q9NR50 452 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 SIRT3Q9NTG7 399 aaPredicted RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 NCKIPSDQ9NZQ3 722 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 NDRG3Q9UGV2 375 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 HAO1Q9UJM8 370 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 INTS6Q9UL03 887 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 CORO1CQ9ULV4 474 aaPredicted RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 LSM4Q9Y4Z0 139 aaKnown RBP2.53□□□□□ -2
HMGB1P35-201ENST00000503360 KCNE2Q9Y6J6 123 aa2.53□□□□□ -2
HMGB1P35-201ENST00000503360 FAM237BA0A1B0GVD1 139 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 ANKRD18BA2A2Z9 1011 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 DYTNA2CJ06 578 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 IFITM10A6NMD0 228 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 USP17L23D6RBM5 183 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 TAF4O00268 1085 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 CHL1O00533 1208 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 AP3D1O14617 1153 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 BCAT2O15382 392 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 DOK2O60496 412 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 HNRNPCL1O60812 293 aaKnown RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 PTP4A3O75365 173 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 RGS11O94810 467 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 SYF2O95926 243 aaKnown RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 MT-CYBP00156 380 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 ETFAP13804 333 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 ITGAXP20702 1163 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 DCTDP32321 178 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 GABRB2P47870 512 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms