RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TAF12Q16514 161 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 DDR2Q16832 855 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 MGAT5BQ3V5L5 792 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 HSP90B2PQ58FF3 399 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SPDYCQ5MJ68 293 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 BRMS1LQ5PSV4 323 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 CFAP58Q5T655 872 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ACBD5Q5T8D3 534 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC9A4Q6AI14 798 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC8B1Q6J4K2 584 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SYCE2Q6PIF2 218 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 PRSS55Q6UWB4 352 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 TAS1R1Q7RTX1 841 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 BNIPLQ7Z465 357 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 TADA2BQ86TJ2 420 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM131BQ86XD5 332 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 DDX42Q86XP3 938 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 PALM2Q8IXS6 379 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 RNF168Q8IYW5 571 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC39A11Q8N1S5 342 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 MREGQ8N565 214 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ALLCQ8N6M5 410 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 CCDC185Q8N715 623 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 COLGALT1Q8NBJ5 622 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 TXNDC5Q8NBS9 432 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ATAD1Q8NBU5 361 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SCAMP5Q8TAC9 235 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ACTL9Q8TC94 416 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ATG4AQ8WYN0 398 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ART4Q93070 314 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 FAF2Q96CS3 445 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SERPINB11Q96P15 392 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 PGLYRP2Q96PD5 576 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 BBC3Q96PG8 261 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 RUFY1Q96T51 708 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 FMO2Q99518 471 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 SEPT5Q99719 369 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 HERPUD2Q9BSE4 406 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 TLR8Q9NR97 1041 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 MRPL17Q9NRX2 175 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 PIGVQ9NUD9 493 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 TMEM30AQ9NV96 361 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 GPATCH2LQ9NWQ4 482 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF446Q9NWS9 450 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 CLIC5Q9NZA1 410 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 IL37Q9NZH6 218 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 PPP4R1LQ9P1A2 415 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 KIAA1522Q9P206 1035 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 AFF4Q9UHB7 1163 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ANAPC5Q9UJX4 755 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 ING1Q9UK53 422 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 R3HDM2Q9Y2K5 976 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 RWDD3Q9Y3V2 267 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 RAD54BQ9Y620 910 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 CDY1Q9Y6F8 540 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 COL4A3Q01955 1670 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 NLRC5Q86WI3 1866 aa5.43□□□□□ -1.54
HMGXB4-208ENST00000498325 NAV2Q8IVL1 2488 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 A0A1W2PQH9 124 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM92AA1XBS5 289 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 BCLAF3A2AJT9 711 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 NPEPPSL1A6NEC2 478 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 HACD1B0YJ81 288 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 EEF2KO00418 725 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 DNALI1O14645 258 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 NCAM2O15394 837 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CREB3O43889 395 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 OPA1O60313 960 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ABLIM3O94929 683 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 IFNB1P01574 187 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 DCNP07585 359 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CD3EP07766 207 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CSH1P0DML2 217 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CSH2P0DML3 217 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 IL4RP24394 825 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 SERPINB6P35237 376 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 HSPA9P38646 679 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 PBX3P40426 434 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 RPL21P46778 160 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ALDH1A3P47895 512 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 PPP3CCP48454 512 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 KPNA1P52294 538 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ADCY2Q08462 1091 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 PLD1Q13393 1074 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 RAB33AQ14088 237 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 PPP2R5DQ14738 602 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 NOMO1Q15155 1222 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 OASLQ15646 514 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CA9Q16790 459 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 RAB6CQ53S08 254 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 MSANTD2Q6P1R3 559 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF585AQ6P3V2 769 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 C1orf228Q6PIY5 440 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CYP4V2Q6ZWL3 525 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 BHLHA9Q7RTU4 235 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ANKS1BQ7Z6G8 1248 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CROCCP2Q86T23 111 aa5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 CDKL3Q8IVW4 592 aaPredicted RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 GSPT2Q8IYD1 628 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF276Q8N554 614 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms