RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TREM1Q9NP99 234 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 LZTFL1Q9NQ48 299 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 NINJ2Q9NZG7 142 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 HSFX1Q9UBD0 423 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CPA4Q9UI42 421 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ZFP69BQ9UJL9 534 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDHA12Q9UN75 941 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 FRMPD4Q14CM0 1322 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDH11XQ9BZA7 1347 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDH11YQ9BZA8 1340 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ADCY9O60503 1353 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GLI2P10070 1586 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 YEATS2Q9ULM3 1422 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SERTM2A0A1B0GWG4 89 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PVALEFA0A1B0GWK0 134 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 EFCAB8A8MWE9 144 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 NT5C1B-RDH14C9J2C7 533 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 H0YAE9 185 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TRIM38O00635 465 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ATP2A1O14983 1001 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 NOS1APO75052 506 aaPredicted RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 H2AFYO75367 372 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GCNT3O95395 438 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TFRCP02786 760 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PRR35P0CG20 571 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ODC1P11926 461 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ICAM2P13598 275 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 BPIP17213 487 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TCN1P20061 433 aaPredicted RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 IL11P20809 199 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNA5P22460 613 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PKLRP30613 574 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 IL13P35225 146 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CRKLP46109 303 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 NPEPPSP55786 919 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SCAND1P57086 179 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GNG2P59768 71 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TRA2BP62995 288 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PHC1P78364 1004 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ADAM17P78536 824 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MAPK7Q13164 816 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CHIT1Q13231 466 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 DCTN2Q13561 401 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MORF4L2Q15014 288 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 RRS1Q15050 365 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TRADDQ15628 312 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SMAD2Q15796 467 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CHRNA6Q15825 494 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SMU1Q2TAY7 513 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 LSM12Q3MHD2 195 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TOR1AIP1Q5JTV8 583 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 DGKKQ5KSL6 1271 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ATAT1Q5SQI0 421 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 C1orf146Q5VVC0 180 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PRAMEF18Q5VWM3 479 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PLEKHA7Q6IQ23 1121 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ARMC6Q6NXE6 501 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ZCCHC12Q6PEW1 402 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 DCLRE1AQ6PJP8 1040 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 APOA5Q6Q788 366 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 Q6ZNX1 250 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 USP37Q86T82 979 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM200AQ86VY9 491 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CDR2LQ86X02 465 aaPredicted RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 NME9Q86XW9 330 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CACNA2D3Q8IZS8 1091 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SIMC1Q8NDZ2 872 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ZMIZ2Q8NF64 920 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 GPR156Q8NFN8 814 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 DEPDC1BQ8WUY9 529 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 KCTD4Q8WVF5 259 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CAPSLQ8WWF8 208 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 RASSF5Q8WWW0 418 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 POMGNT1Q8WZA1 660 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 EME1Q96AY2 570 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PTERQ96BW5 349 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 RANBP9Q96S59 729 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PRRX2Q99811 253 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PYM1Q9BRP8 204 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CNPPD1Q9BV87 410 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 OSBPL6Q9BZF3 934 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 POLR1EQ9GZS1 481 aaKnown RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 NAPBQ9H115 298 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC26A1Q9H2B4 701 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 DPEP3Q9H4B8 488 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PLEKHA4Q9H4M7 779 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 IL1RAPL2Q9NP60 686 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC35D1Q9NTN3 355 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PTTG2Q9NZH5 202 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 RCOR3Q9P2K3 495 aaPredicted RBP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ASH2LQ9UBL3 628 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNHIT2Q9UHR6 403 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 SCOCQ9UIL1 159 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PADI4Q9UM07 663 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 MTMR6Q9Y217 621 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 ZDHHC9Q9Y397 364 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDHA3Q9Y5H8 950 aa3.13□□□□□ -1.91
SNRNP48-202ENST00000496946 CFAP43Q8NDM7 1665 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms