RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 RALGPS1Q5JS13 557 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 SEL1L2Q5TEA6 688 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 MEI1Q5TIA1 1274 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 DARS2Q6PI48 645 aaKnown RBP9.88□□□□□ -0.83
CALD1-223ENST00000496024 ZNF662Q6ZS27 426 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 PTAR1Q7Z6K3 402 aaPredicted RBP9.88□□□□□ -0.83
CALD1-223ENST00000496024 MFSD2AQ8NA29 543 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 OR13H1Q8NG92 308 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 SPATA22Q8NHS9 363 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 KLHDC7BQ96G42 594 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 QKIQ96PU8 341 aaKnown RBP eCLIP9.88□□□□□ -0.83
CALD1-223ENST00000496024 C1QTNF2Q9BXJ5 285 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 ZDHHC5Q9C0B5 715 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 GLOD4Q9HC38 313 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 UBP1Q9NZI7 540 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 EFR3BQ9Y2G0 817 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 DNAH14Q0VDD8 3507 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 A0A1W2PQ67 120 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 POM121BA6NF01 834 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 PCNX2A6NKB5 2137 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 HACD1B0YJ81 288 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 MTSS1O43312 755 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 PMPCBO75439 489 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 CER1O95813 267 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 MMP2P08253 660 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 ELFN1P0C7U0 828 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 THEGLP0DJG4 465 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 RBP3P10745 1247 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 NFKB1P19838 968 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 SDHBP21912 280 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 CA4P22748 312 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 CES1P23141 567 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 CTSKP43235 329 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 LIMK1P53667 647 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 SKOR1P84550 965 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 RALGDSQ12967 914 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 ACOX1Q15067 660 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 ALG1LQ6GMV1 187 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 IL27RAQ6UWB1 636 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 LIPIQ6XZB0 460 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 GCNT7Q6ZNI0 430 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 Q6ZSR6 202 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 DPPA4Q7L190 304 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 PID1Q7Z2X4 250 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 CDKL3Q8IVW4 592 aaPredicted RBP9.87□□□□□ -0.83
CALD1-223ENST00000496024 ZNF567Q8N184 647 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 TMEM145Q8NBT3 493 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 LPCAT1Q8NF37 534 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 TRIM58Q8NG06 486 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 PIH1D2Q8WWB5 315 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 HTR3CQ8WXA8 447 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 TEKT5Q96M29 485 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 KLF6Q99612 283 aaPredicted RBP9.87□□□□□ -0.83
CALD1-223ENST00000496024 SLC25A51Q9H1U9 297 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 PCDH9Q9HC56 1237 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 GDF3Q9NR23 364 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 MBNL1Q9NR56 388 aaKnown RBP9.87□□□□□ -0.83
CALD1-223ENST00000496024 PHTF1Q9UMS5 762 aa9.87□□□□□ -0.83
CALD1-223ENST00000496024 FNDC3AQ9Y2H6 1198 aaKnown RBP9.87□□□□□ -0.83
CALD1-223ENST00000496024 R3HDM2Q9Y2K5 976 aaKnown RBP9.87□□□□□ -0.83
CALD1-223ENST00000496024 NPIPB15A6NHN6 443 aaPredicted RBP9.86□□□□□ -0.83
CALD1-223ENST00000496024 A6NNZ2 444 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 FPGTO14772 594 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 KCNN4O15554 427 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 ZSCAN12O43309 604 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 MT-CYBP00156 380 aaPredicted RBP9.86□□□□□ -0.83
CALD1-223ENST00000496024 PCCBP05166 539 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 CYP2A6P11509 494 aaPredicted RBP9.86□□□□□ -0.83
CALD1-223ENST00000496024 NFKBIAP25963 317 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 VIPR1P32241 457 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 CXCR5P32302 372 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 CD68P34810 354 aaPredicted RBP9.86□□□□□ -0.83
CALD1-223ENST00000496024 HNF1BP35680 557 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 IGFALSP35858 605 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 NXPH1P58417 271 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 XRCC4Q13426 336 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 ARHGEF7Q14155 803 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 GALNT3Q14435 633 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 PUM1Q14671 1186 aaKnown RBP eCLIP9.86□□□□□ -0.83
CALD1-223ENST00000496024 IRF4Q15306 451 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 CNGA3Q16281 694 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 ZNF569Q5MCW4 686 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 USP45Q70EL2 814 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 TSPAN33Q86UF1 283 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 IQCHQ86VS3 1027 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 ZSCAN30Q86W11 494 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 SPATS2Q86XZ4 545 aaKnown RBP9.86□□□□□ -0.83
CALD1-223ENST00000496024 REXO1L1PQ8IX06 675 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 NDUFAF2Q8N183 169 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 ATG4AQ8WYN0 398 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 IMP4Q96G21 291 aaKnown RBP9.86□□□□□ -0.83
CALD1-223ENST00000496024 BMFQ96LC9 184 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 FERMT1Q9BQL6 677 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 RTKNQ9BST9 563 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 C1QTNF7Q9BXJ2 289 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 TLR10Q9BXR5 811 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 TDRD1Q9BXT4 1180 aaKnown RBP9.86□□□□□ -0.83
CALD1-223ENST00000496024 CAAP1Q9H8G2 361 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 TM7SF3Q9NS93 570 aa9.86□□□□□ -0.83
CALD1-223ENST00000496024 DLL3Q9NYJ7 618 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms