RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CNOT8Q9UFF9 292 aaKnown RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 LAS1LQ9Y4W2 734 aaKnown RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 INSL5Q9Y5Q6 135 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 A3GALT2U3KPV4 340 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 TDRD9Q8NDG6 1382 aaKnown RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 BECN2A8MW95 431 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 PTGES3LE9PB15 166 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 H3BNX3 289 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 MT-CYBP00156 380 aaPredicted RBP4.59□□□□□ -1.67
SMC4-224ENST00000494612 MMP3P08254 477 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 ACADMP11310 421 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 ETFAP13804 333 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 TNFRSF1BP20333 461 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 PIGAP37287 484 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 HADHAP40939 763 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 CASP2P42575 452 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 HYAL1Q12794 435 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 EIF4A2Q14240 407 aaKnown RBP4.59□□□□□ -1.67
SMC4-224ENST00000494612 MYBPC2Q14324 1141 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 CCNG2Q16589 344 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 MZT2BQ6NZ67 158 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 CLEC4GQ6UXB4 293 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 Q6ZSV7 163 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 NEK10Q6ZWH5 1172 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 USP43Q70EL4 1123 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 DENND6AQ8IWF6 608 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 RBFAQ8N0V3 343 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 TMEM116Q8NCL8 245 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 ZMIZ2Q8NF64 920 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 ERGIC1Q969X5 290 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 ZNF570Q96NI8 536 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 MSTO1Q9BUK6 570 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 KLHL31Q9H511 634 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 PRKRIP1Q9H875 184 aaPredicted RBP4.59□□□□□ -1.67
SMC4-224ENST00000494612 MAGEE1Q9HCI5 957 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 ZBTB40Q9NUA8 1239 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 PLK2Q9NYY3 685 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 NCKIPSDQ9NZQ3 722 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 HAO1Q9UJM8 370 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 SQORQ9Y6N5 450 aa4.59□□□□□ -1.67
SMC4-224ENST00000494612 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 TTC36A6NLP5 189 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 GTPBP1O00178 669 aaKnown RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 LDB2O43679 373 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 KLK8O60259 260 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 NKX2-2O95096 273 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 MLYCDO95822 493 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 KLKB1P03952 638 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 EIF2S1P05198 315 aaKnown RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 FGF2P09038 288 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 BDNFP23560 247 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 DCTDP32321 178 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 SHMT1P34896 483 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 BSGP35613 385 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 MLH1P40692 756 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 DRG2P55039 364 aaKnown RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 GOLGA8DPQ0D2H9 430 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 DUSP6Q16828 381 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 ZNF284Q2VY69 593 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 DPCR1Q3MIW9 517 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 CFAP161Q6P656 301 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 MON1BQ7L1V2 547 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 GSTA5Q7RTV2 222 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 PIM3Q86V86 326 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 ADSSL1Q8N142 457 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 TTC39CQ8N584 583 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 WDTC1Q8N5D0 677 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 ARRDC2Q8TBH0 407 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 ASB5Q8WWX0 329 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 MMABQ96EY8 250 aaPredicted RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 TIGD1Q96MW7 591 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 GHITMQ9H3K2 345 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 PLEKHA4Q9H4M7 779 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 FBRSL1Q9HCM7 1045 aaKnown RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 SMYD2Q9NRG4 433 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 CYSLTR2Q9NS75 346 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 ANKRD10Q9NXR5 420 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 CISD1Q9NZ45 108 aaKnown RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 FBXO2Q9UK22 296 aaPredicted RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 ZNF215Q9UL58 517 aaPredicted RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 AAR2Q9Y312 384 aaKnown RBP4.58□□□□□ -1.68
SMC4-224ENST00000494612 ADAM18Q9Y3Q7 739 aa4.58□□□□□ -1.68
SMC4-224ENST00000494612 A0A1B0GVT2 93 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 RPS10-NUDT3A0A1W2PQS6 291 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 ANKRD18BA2A2Z9 1011 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 A6NCN8 305 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 HMGB1P1B2RPK0 211 aaPredicted RBP4.57□□□□□ -1.68
SMC4-224ENST00000494612 BTBD18B2RXH4 712 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 F5H0A9 414 aaPredicted RBP4.57□□□□□ -1.68
SMC4-224ENST00000494612 TNFRSF13BO14836 293 aaPredicted RBP4.57□□□□□ -1.68
SMC4-224ENST00000494612 ITM2AO43736 263 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 CCNDBP1O95273 360 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 MYZAPP0CAP1 466 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 LAMP2P13473 410 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 ARL1P40616 181 aaPredicted RBP4.57□□□□□ -1.68
SMC4-224ENST00000494612 ENTPD1P49961 510 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 F2RL1P55085 397 aa4.57□□□□□ -1.68
SMC4-224ENST00000494612 FAM27E3Q08E93 113 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms