RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MOCS1Q9NZB8 636 aa14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 RPL26L1Q9UNX3 145 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-210ENST00000492909 COL4A2P08572 1712 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 ZCWPW2A0A1B0GU75 182 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 CCDC78A2IDD5 438 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 WASH3PC4AMC7 463 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 ASGR2P07307 311 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 SOX9P48436 509 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 FRG1Q14331 258 aaKnown RBP14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 EFTUD2Q15029 972 aaKnown RBP eCLIP14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 C6orf89Q6UWU4 347 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 NLRP9Q7RTR0 991 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 SFTPA1Q8IWL2 248 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 SUGP1Q8IWZ8 645 aaKnown RBP14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 BRSK1Q8TDC3 778 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 CERS2Q96G23 380 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 ZNF778Q96MU6 729 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 FCRL3Q96P31 734 aaPredicted RBP14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 P2RY13Q9BPV8 354 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 SLC24A2Q9UI40 661 aa14.16□□□□□ -0.14
PDZRN3-210ENST00000492909 FAM159BA6NKW6 160 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 RGS16O15492 202 aaPredicted RBP14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 PIAS1O75925 651 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 C1QAP02745 245 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 PRKCGP05129 697 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 PIRTP0C851 137 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 PAMP19021 973 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 GRIA4P48058 902 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 ZNF234Q14588 700 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 QPCTQ16769 361 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 ZNF449Q6P9G9 518 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 LRRC6Q86X45 466 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 TDRPQ86YL5 185 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 CTAGE3PQ8IX95 158 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 UNC5BQ8IZJ1 945 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 RIBC1Q8N443 379 aaPredicted RBP14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 CHST14Q8NCH0 376 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 CDKL2Q92772 493 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 PTPRN2Q92932 1015 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 ZNF641Q96N77 438 aaPredicted RBP14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 PAFAH2Q99487 392 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 HEPHQ9BQS7 1158 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 SUV39H2Q9H5I1 410 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 TREX1Q9NSU2 369 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 IKBKGQ9Y6K9 419 aa14.15□□□□□ -0.14
PDZRN3-210ENST00000492909 MROH6A6NGR9 719 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 FSBPO95073 299 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 PAPSS2O95340 614 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 CRTAMO95727 393 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 GCAP28676 217 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 CTHP32929 405 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 MSH2P43246 934 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 GALK1P51570 392 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 MGAT5Q09328 741 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 HNRNPA1L2Q32P51 320 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 TSTD2Q5T7W7 516 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 SERPINA13PQ6UXR4 307 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 ZNF366Q8N895 744 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 PIH1D2Q8WWB5 315 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 DNASE1L2Q92874 299 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 VOPP1Q96AW1 172 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 MRRFQ96E11 262 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 HACD3Q9P035 362 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 ZFATQ9P243 1243 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 PSMC3IPQ9P2W1 217 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 EDDM13A0A1B0GTR0 161 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 A0A1W2PQ67 120 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 SPECC1L-ADORA2AF8WAN1 911 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 LDB2O43679 373 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 UGT2B4P06133 528 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 INHBAP08476 426 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 ERVK-10P10266 1014 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 KCNA4P22459 653 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 SLC8A1P32418 973 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 RASA2Q15283 850 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 E2F5Q15329 346 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 CNGA3Q16281 694 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 PDPK2PQ6A1A2 396 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 ESRP1Q6NXG1 681 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 GDPD4Q6W3E5 623 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 GLT6D1Q7Z4J2 308 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 KCNMB4Q86W47 210 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 RALGPS2Q86X27 583 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 GJD3Q8N144 294 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 PPM1NQ8N819 430 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 GRIN3AQ8TCU5 1115 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 SLC44A1Q8WWI5 657 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 PEX13Q92968 403 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 ECHDC3Q96DC8 303 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 LRIG1Q96JA1 1093 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 UHRF1Q96T88 793 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 DHRS4Q9BTZ2 278 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 STMN4Q9H169 189 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 TMEM245Q9H330 911 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 MTG2Q9H4K7 406 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 FBRSL1Q9HCM7 1045 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 SMYD2Q9NRG4 433 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 C20orf96Q9NUD7 363 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms