RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RPIAP49247 311 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 SPIDRQ14159 915 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 GLE1Q53GS7 698 aaKnown RBP13.3□□□□□ -0.28
HDAC3-213ENST00000492506 PRRT3Q5FWE3 981 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 EFHC1Q5JVL4 640 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 PAPD7Q5XG87 772 aaKnown RBP13.3□□□□□ -0.28
HDAC3-213ENST00000492506 OLFML1Q6UWY5 402 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 ATG14Q6ZNE5 492 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 USP53Q70EK8 1073 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 SETD3Q86TU7 594 aaPredicted RBP13.3□□□□□ -0.28
HDAC3-213ENST00000492506 MMGT1Q8N4V1 131 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 TEX9Q8N6V9 391 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 TRIM58Q8NG06 486 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 OR7D4Q8NG98 312 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 ZNF473Q8WTR7 871 aaKnown RBP13.3□□□□□ -0.28
HDAC3-213ENST00000492506 ZFAND2BQ8WV99 257 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 BTN2A2Q8WVV5 523 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 ASB12Q8WXK4 309 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 CENPTQ96BT3 561 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 TBATAQ96M53 351 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 CEP63Q96MT8 703 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 GSDMAQ96QA5 445 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 SEMA3CQ99985 751 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 SUDS3Q9H7L9 328 aaPredicted RBP13.3□□□□□ -0.28
HDAC3-213ENST00000492506 PIGVQ9NUD9 493 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 ARHGEF38Q9NXL2 777 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 APOBEC3BQ9UH17 382 aaKnown RBP13.3□□□□□ -0.28
HDAC3-213ENST00000492506 GGT7Q9UJ14 662 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 PADI4Q9UM07 663 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 NBASA2RRP1 2371 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 GOLGA6L10A6NI86 522 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 M0QYT0 321 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 AGPSO00116 658 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 THAP12O43422 761 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 TSPAN6O43657 245 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 MFAP3LO75121 409 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 GJB6O95452 261 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 CD160O95971 181 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 CELA2BP08218 269 aaPredicted RBP13.29□□□□□ -0.28
HDAC3-213ENST00000492506 FAM87AP0C7U9 286 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 ATP1A3P13637 1013 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 HGFP14210 728 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 FERP16591 822 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 TFE3P19532 575 aaPredicted RBP13.29□□□□□ -0.28
HDAC3-213ENST00000492506 GNA15P30679 374 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 CXCR3P49682 368 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 SERPINH1P50454 418 aaKnown RBP13.29□□□□□ -0.28
HDAC3-213ENST00000492506 CCNHP51946 323 aaPredicted RBP13.29□□□□□ -0.28
HDAC3-213ENST00000492506 ARF5P84085 180 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 CETN1Q12798 172 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 NR1I3Q14994 352 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 RNF187Q5TA31 235 aaPredicted RBP13.29□□□□□ -0.28
HDAC3-213ENST00000492506 C6orf89Q6UWU4 347 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 FAM183BPQ6ZVS7 135 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 RAB11FIP2Q7L804 512 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 PHACTR4Q8IZ21 702 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 FBXO39Q8N4B4 442 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 DENND6BQ8NEG7 585 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 GLMNQ92990 594 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 NPY6RQ99463 290 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 HEPHQ9BQS7 1158 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 CEP44Q9C0F1 390 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 MPP6Q9NZW5 540 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 ITM2BQ9Y287 266 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 USP9YO00507 2555 aaPredicted RBP13.29□□□□□ -0.28
HDAC3-213ENST00000492506 ANKRD36A6QL64 1941 aa13.29□□□□□ -0.28
HDAC3-213ENST00000492506 ARHGEF17Q96PE2 2063 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 SDK2Q58EX2 2172 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 IGLV3-10A0A075B6K4 115 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 A0A1W2PQM1 296 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 MGRN1O60291 552 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 DAB1O75553 588 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 TSHRP16473 764 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 WT1P19544 449 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 NOS2P35228 1153 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 IGFALSP35858 605 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 RECQLP46063 649 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 SH3BGRP55822 239 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 SGCGQ13326 291 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 EIF3IQ13347 325 aaKnown RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 CARD16Q5EG05 197 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 TTC19Q6DKK2 380 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 CAPRIN2Q6IMN6 1127 aaKnown RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 TFAP2DQ7Z6R9 452 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 TRIM59Q8IWR1 403 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 PCDH20Q8N6Y1 951 aaKnown RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 NT5C3BQ969T7 300 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 FOXP3Q9BZS1 431 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 INTS2Q9H0H0 1204 aaKnown RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 TKTL2Q9H0I9 626 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 EPB41L5Q9HCM4 733 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 UBE2TQ9NPD8 197 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-213ENST00000492506 LZTFL1Q9NQ48 299 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 TMPRSS4Q9NRS4 437 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 FANCLQ9NW38 375 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 ACTL7AQ9Y615 435 aa13.28□□□□□ -0.28
HDAC3-213ENST00000492506 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms