RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 C17orf82Q86X59 251 aaPredicted RBP8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 PHF13Q86YI8 300 aaPredicted RBP8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 HID1Q8IV36 788 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 SLITRK4Q8IW52 837 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 PYROXD2Q8N2H3 581 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 TSACCQ96A04 125 aaPredicted RBP8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 ECHDC3Q96DC8 303 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 HMCESQ96FZ2 354 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 WDR92Q96MX6 357 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 GBP4Q96PP9 640 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 WRAP53Q9BUR4 548 aaKnown RBP8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 SUV39H2Q9H5I1 410 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 PDFQ9HBH1 243 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 EPB41L5Q9HCM4 733 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 PCDH12Q9NPG4 1184 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 DONSONQ9NYP3 566 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 GULP1Q9UBP9 304 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 KLQ9UEF7 1012 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 IL17BQ9UHF5 180 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 DOLKQ9UPQ8 538 aa8.51□□□□□ -1.05
APOBEC3F-204ENST00000491387 DOPEY2Q9Y3R5 2298 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 SIGLEC16A6NMB1 481 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 CYSRT1A8MQ03 144 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 EIF3CLB5ME19 914 aaKnown RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 INSIG1O15503 277 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 FGF10O15520 208 aaPredicted RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 ARHGAP6O43182 974 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 CCP110O43303 1012 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 NUDT21O43809 227 aaKnown RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 BUB1BO60566 1050 aaPredicted RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 PRAMEF11O60813 436 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 TNFP01375 233 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 XPAP23025 273 aaPredicted RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 KELP23276 732 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 EPHB2P29323 1055 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 LIG3P49916 1009 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 ZNF143P52747 638 aaPredicted RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 UBXN1Q04323 297 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 HLTFQ14527 1009 aaKnown RBP eCLIP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 NR1D2Q14995 579 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 CLEC16AQ2KHT3 1053 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 LRRC73Q5JTD7 316 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 CCDC183Q5T5S1 534 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 AFMIDQ63HM1 303 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 KCTD16Q68DU8 428 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 CAVIN1Q6NZI2 390 aaKnown RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 ERAP2Q6P179 960 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 WDR59Q6PJI9 974 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 SASS6Q6UVJ0 657 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 ENPP7Q6UWV6 458 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 USP53Q70EK8 1073 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 ZNF438Q7Z4V0 828 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 SPRED1Q7Z699 444 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 CCNJLQ8IV13 435 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 C3orf20Q8ND61 904 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 FAM172AQ8WUF8 416 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 PCMTD1Q96MG8 357 aaPredicted RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 EIF3CQ99613 913 aaKnown RBP8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 FUCA2Q9BTY2 467 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 FOXP3Q9BZS1 431 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 TRIM7Q9C029 511 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 LRRC19Q9H756 370 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 CATSPERBQ9H7T0 1116 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 GPATCH2LQ9NWQ4 482 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 SEPT10Q9P0V9 454 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 FZD10Q9ULW2 581 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 ATP8A1Q9Y2Q0 1164 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 LOXL2Q9Y4K0 774 aa8.5□□□□□ -1.05
APOBEC3F-204ENST00000491387 TMCO5BA8MYB1 307 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 HGSO14964 777 aaPredicted RBP8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 SUV39H1O43463 412 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 PIGNO95427 931 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 CALB1P05937 261 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 JMJD7P0C870 316 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 HGFP14210 728 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 GPD1P21695 349 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 STAT1P42224 750 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 NSFP46459 744 aaKnown RBP8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 NDST2P52849 883 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 RPL7AP62424 266 aaKnown RBP8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 B4GALNT1Q00973 533 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 NSUN2Q08J23 767 aaKnown RBP eCLIP8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 RALGDSQ12967 914 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 SQSTM1Q13501 440 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 TGIF1Q15583 401 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 NFKBIBQ15653 356 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 C14orf28Q4W4Y0 310 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 EFHC2Q5JST6 749 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 MON1BQ7L1V2 547 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 ZSWIM9Q86XI8 627 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 NEK11Q8NG66 645 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 OR56A4Q8NGH8 313 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 GPBAR1Q8TDU6 330 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 OR1E3Q8WZA6 343 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 FUBP1Q96AE4 644 aaKnown RBP8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 PDXPQ96GD0 296 aa8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 NAP1L5Q96NT1 182 aaPredicted RBP8.49□□□□□ -1.05
APOBEC3F-204ENST00000491387 ERGIC2Q96RQ1 377 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms