RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ENPP7Q6UWV6 458 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 DPPA4Q7L190 304 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 IFI44Q8TCB0 444 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 HNRNPLLQ8WVV9 542 aaKnown RBP18.09■□□□□ 0.49
HMGN1-219ENST00000491183 SPOCK2Q92563 424 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 NUDCD1Q96RS6 583 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 MGME1Q9BQP7 344 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 BOCQ9BWV1 1114 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 SLC13A1Q9BZW2 595 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 NOD2Q9HC29 1040 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 RCOR3Q9P2K3 495 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-219ENST00000491183 AK5Q9Y6K8 562 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 LRP4O75096 1905 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 CELSR3Q9NYQ7 3312 aa18.08■□□□□ 0.49
HMGN1-219ENST00000491183 DSPP15924 2871 aaKnown RBP18.08■□□□□ 0.48
HMGN1-219ENST00000491183 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.08■□□□□ 0.48
HMGN1-219ENST00000491183 CPED1A4D0V7 1026 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 EME2A4GXA9 379 aaPredicted RBP18.08■□□□□ 0.48
HMGN1-219ENST00000491183 HSPA9P38646 679 aaKnown RBP18.08■□□□□ 0.48
HMGN1-219ENST00000491183 HK3P52790 923 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 TAS2R40P59535 323 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 MAXP61244 160 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 MTM1Q13496 603 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 DPYSL3Q14195 570 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 NFATC4Q14934 902 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 SLC18A3Q16572 532 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 HADHQ16836 314 aaKnown RBP18.08■□□□□ 0.48
HMGN1-219ENST00000491183 HID1Q8IV36 788 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 ATPAF2Q8N5M1 289 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 PAF1Q8N7H5 531 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 OR8K1Q8NGG5 319 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 DNAJC7Q99615 494 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 SCUBE2Q9NQ36 999 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 EVA1BQ9NVM1 165 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 CTTNBP2NLQ9P2B4 639 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 B4GALT6Q9UBX8 382 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 PCDHB1Q9Y5F3 818 aa18.08■□□□□ 0.48
HMGN1-219ENST00000491183 COL27A1Q8IZC6 1860 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-219ENST00000491183 A0A087WV48 116 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 TLX3O43711 291 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-219ENST00000491183 PROSCO94903 275 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 ANXA6P08133 673 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 TGM2P21980 687 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 SERPINB6P35237 376 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 TRAF2Q12933 501 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 PAFAH1B3Q15102 231 aaKnown RBP18.07■□□□□ 0.48
HMGN1-219ENST00000491183 PTPRRQ15256 657 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 C6orf132Q5T0Z8 1188 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 MARC1Q5VT66 337 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 NCBP2-AS2Q69YL0 99 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 SPECC1LQ69YQ0 1117 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 EFL1Q7Z2Z2 1120 aaKnown RBP18.07■□□□□ 0.48
HMGN1-219ENST00000491183 SLC35F3Q8IY50 421 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 PELI3Q8N2H9 469 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 CBARPQ8N350 705 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-219ENST00000491183 TEX26Q8N6G2 289 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 PCDH19Q8TAB3 1148 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 FUBP1Q96AE4 644 aaKnown RBP18.07■□□□□ 0.48
HMGN1-219ENST00000491183 UVRAGQ9P2Y5 699 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 RP1P56715 2156 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 FAM208BQ5VWN6 2430 aa18.07■□□□□ 0.48
HMGN1-219ENST00000491183 LAMA5O15230 3695 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 TMEM202A6NGA9 273 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 CASC3O15234 703 aaKnown RBP18.06■□□□□ 0.48
HMGN1-219ENST00000491183 MFSD11O43934 449 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 SOCS5O75159 536 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 RASGRP1O95267 797 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 TPM3P06753 285 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 H2AFZP0C0S5 128 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 ELFN1P0C7U0 828 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 HTR1BP28222 390 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 GJC1P36383 396 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 MMP13P45452 471 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 BLKP51451 505 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 SRP54P61011 504 aaKnown RBP18.06■□□□□ 0.48
HMGN1-219ENST00000491183 NR0B2Q15466 257 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 PERM1Q5SV97 790 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 H2AFVQ71UI9 128 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 RD3Q7Z3Z2 195 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 MAPK15Q8TD08 544 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 PDCD6IPQ8WUM4 868 aaKnown RBP18.06■□□□□ 0.48
HMGN1-219ENST00000491183 CTNNBL1Q8WYA6 563 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-219ENST00000491183 COQ10AQ96MF6 247 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 WDR92Q96MX6 357 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 CHP1Q99653 195 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 ABCG4Q9H172 646 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 NCKIPSDQ9NZQ3 722 aa18.06■□□□□ 0.48
HMGN1-219ENST00000491183 A0A1W2PQ67 120 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 SSU72P8A0A1W2PR75 194 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 CBFA2T2O43439 604 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 BRINP1O60477 761 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 CSO75390 466 aaKnown RBP18.05■□□□□ 0.48
HMGN1-219ENST00000491183 MAP3K6O95382 1288 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 CPP00450 1065 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 CTSEP14091 401 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 TRIM23P36406 574 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 GALNT2Q10471 571 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 IHHQ14623 411 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 ACOX1Q15067 660 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 ELOCQ15369 112 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms