RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, human

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTDSP1-210	ENST00000491064	TMEM35B	Q8NCS4	154 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	OR56A4	Q8NGH8	313 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CCL4L1	Q8NHW4	92 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	GPBAR1	Q8TDU6	330 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	FUBP1	Q96AE4	644 aa	Known RBP	13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	HMCES	Q96FZ2	354 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	TAAR9	Q96RI9	348 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	NUDT22	Q9BRQ3	303 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	RAB6C	Q9H0N0	254 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CDH19	Q9H159	772 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	DPEP2	Q9H4A9	486 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	PCDH12	Q9NPG4	1184 aa		13.73	□□□□□ -0.21
CTDSP1-210	ENST00000491064	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CREBBP	Q92793	2442 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	IGHV5-10-1	A0A0J9YXX1	117 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	TSPAN11	A1L157	253 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	BLACE	A4D250	179 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	GOLGA8S	H3BPF8	625 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	LRIG2	O94898	1065 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	PON1	P27169	355 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ADRA1B	P35368	520 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	MMP12	P39900	470 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	LIG3	P49916	1009 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	OR1D5	P58170	312 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	RHOA	P61586	193 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ATP11A	P98196	1134 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	UGP2	Q16851	508 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	INO80D	Q53TQ3	878 aa	Predicted RBP	13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ARC	Q7LC44	396 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ZNF438	Q7Z4V0	828 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	C17orf82	Q86X59	251 aa	Predicted RBP	13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	FAM71A	Q8IYT1	594 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	HCAR2	Q8TDS4	363 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CASKIN2	Q8WXE0	1202 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CATSPER2	Q96P56	530 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	MAGEB5	Q9BZ81	275 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	SIX2	Q9NPC8	291 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	DNAJC12	Q9UKB3	198 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	B3GALT1	Q9Y5Z6	326 aa		13.72	□□□□□ -0.21
CTDSP1-210	ENST00000491064	GTPBP10	A4D1E9	387 aa	Known RBP	13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	GOLGA6L4	A6NEF3	574 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ZNF891	A8MT65	544 aa	Predicted RBP	13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CACNB4	O00305	520 aa	Predicted RBP	13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	TNFRSF10C	O14798	259 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ALDH4A1	P30038	563 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	MAZ	P56270	477 aa	Known RBP	13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	NR1D2	Q14995	579 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CLPP	Q16740	277 aa	Predicted RBP	13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ERAP2	Q6P179	960 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CACNA2D3	Q8IZS8	1091 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	EMC1	Q8N766	993 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	KIAA1524	Q8TCG1	905 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	TBC1D31	Q96DN5	1066 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	EXOC2	Q96KP1	924 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CCDC74B	Q96LY2	380 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	NCAPG	Q9BPX3	1015 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	KLC2	Q9H0B6	622 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	PDCL3	Q9H2J4	239 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	SUV39H2	Q9H5I1	410 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	NOL6	Q9H6R4	1146 aa	Known RBP	13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	CYP4F12	Q9HCS2	524 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	LHX3	Q9UBR4	397 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	PLAA	Q9Y263	795 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	DAAM1	Q9Y4D1	1078 aa		13.71	□□□□□ -0.21
CTDSP1-210	ENST00000491064	FGFR1OP	O95684	399 aa	Known RBP	13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	HOXC4	P09017	264 aa	Predicted RBP	13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	KEL	P23276	732 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	CD1C	P29017	333 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	BPIFB4	P59827	614 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	CDO1	Q16878	200 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	ZNF354C	Q86Y25	554 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	CCDC112	Q8NEF3	446 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	ART4	Q93070	314 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	SLC45A3	Q96JT2	553 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	DDA1	Q9BW61	102 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	ATP8A1	Q9Y2Q0	1164 aa		13.7	□□□□□ -0.22
CTDSP1-210	ENST00000491064	CFAP69	A5D8W1	941 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	RHPN2P1	A8MT19	583 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	BIN1	O00499	593 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	CAPN5	O15484	640 aa	Predicted RBP	13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	NKX2-8	O15522	239 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	DUX1	O43812	170 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	RAD1	O60671	282 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	RECQL5	O94762	991 aa	Predicted RBP	13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	PRKCG	P05129	697 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	PLEK	P08567	350 aa	Predicted RBP	13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	CCNB1	P14635	433 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	CYP11B1	P15538	503 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	TRIM23	P36406	574 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	LIMK2	P53671	638 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	CYTH1	Q15438	398 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	TSR1	Q2NL82	804 aa	Known RBP	13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	TAF3	Q5VWG9	929 aa		13.69	□□□□□ -0.22
CTDSP1-210	ENST00000491064	BRAT1	Q6PJG6	821 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms