RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 GPR62Q9BZJ7 368 aa15.78■□□□□ 0.12
BRD9-208ENST00000489816 CLIC5Q9NZA1 410 aa15.78■□□□□ 0.12
BRD9-208ENST00000489816 BTRCQ9Y297 605 aa15.78■□□□□ 0.12
BRD9-208ENST00000489816 A0A1B0GTL3 188 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 GPR39O43194 453 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 LTA4HP09960 611 aaKnown RBP15.77■□□□□ 0.12
BRD9-208ENST00000489816 FOXA1P55317 472 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 YBX1P67809 324 aaKnown RBP15.77■□□□□ 0.12
BRD9-208ENST00000489816 FASTKQ14296 549 aaKnown RBP15.77■□□□□ 0.12
BRD9-208ENST00000489816 SEMA3AQ14563 771 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 PDK3Q15120 406 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 MAPRE1Q15691 268 aaKnown RBP15.77■□□□□ 0.12
BRD9-208ENST00000489816 AGAP9Q5VTM2 703 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 KIAA0930Q6ICG6 404 aaPredicted RBP15.77■□□□□ 0.12
BRD9-208ENST00000489816 MON1AQ86VX9 555 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 CILP2Q8IUL8 1156 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 OR7D4Q8NG98 312 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 DCUN1D1Q96GG9 259 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 SERPINI1Q99574 410 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 ZFYVE28Q9HCC9 887 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 UBXN8O00124 270 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 UBDO15205 165 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 PRKAR2AP13861 404 aaKnown RBP15.77■□□□□ 0.12
BRD9-208ENST00000489816 ME2P23368 584 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 PMLP29590 882 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 HADHAP40939 763 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 CDKN1CP49918 316 aaPredicted RBP15.77■□□□□ 0.12
BRD9-208ENST00000489816 CSRP3P50461 194 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 DUSP4Q13115 394 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 IL23RQ5VWK5 629 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 AMIGO2Q86SJ2 522 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 CNTN4Q8IWV2 1026 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 IFT43Q96FT9 208 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 IMP4Q96G21 291 aaKnown RBP15.77■□□□□ 0.12
BRD9-208ENST00000489816 Q9Y3F1 56 aa15.77■□□□□ 0.12
BRD9-208ENST00000489816 A0A1B0GTW7 788 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 RAMP2O60895 175 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 FAM163BP0C2L3 166 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 CHRM3P20309 590 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 POU4F1Q01851 419 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 PIWIL4Q7Z3Z4 852 aaKnown RBP15.77■□□□□ 0.11
BRD9-208ENST00000489816 SATL1Q86VE3 508 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 RDH11Q8TC12 318 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 SOCS4Q8WXH5 440 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 JADE3Q92613 823 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 MRPL1Q9BYD6 325 aaKnown RBP15.77■□□□□ 0.11
BRD9-208ENST00000489816 TBC1D13Q9NVG8 400 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 UNC80Q8N2C7 3258 aa15.77■□□□□ 0.11
BRD9-208ENST00000489816 CCDC160A6NGH7 325 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 TPST1O60507 370 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 H2AFYO75367 372 aaKnown RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 GOT2P00505 430 aaKnown RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 RPL17P18621 184 aaKnown RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 CES1P23141 567 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 SCNN1BP51168 640 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 HNRNPDQ14103 355 aaKnown RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 MBTPS1Q14703 1052 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 KIF19Q2TAC6 998 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 HABP4Q5JVS0 413 aaKnown RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 KLC3Q6P597 504 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 RSPO2Q6UXX9 243 aaPredicted RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 DDIASQ8IXT1 998 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 TRAF6Q9Y4K3 522 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 TDRD15B5MCY1 1934 aaKnown RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 CCDC162PA2VCL2 907 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 RNASEH2AO75792 299 aaKnown RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 S1PR4O95977 384 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 CYP2C18P33260 490 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 ARL1P40616 181 aaPredicted RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 PSME3P61289 254 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 SLC30A9Q6PML9 568 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 RMDN1Q96DB5 314 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 BPIFA1Q9NP55 256 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 UTP6Q9NYH9 597 aaKnown RBP15.76■□□□□ 0.11
BRD9-208ENST00000489816 UBAP1Q9NZ09 502 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 PSMD13Q9UNM6 376 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 ASB3Q9Y575 518 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 TIMM22Q9Y584 194 aa15.76■□□□□ 0.11
BRD9-208ENST00000489816 AP3B1O00203 1094 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 PSMD12O00232 456 aaPredicted RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 RPS24P62847 133 aaKnown RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 DSC3Q14574 896 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 ISCA2Q86U28 154 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 PTGR2Q8N8N7 351 aaPredicted RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 HBEGFQ99075 208 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 NACA2Q9H009 215 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 PIF1Q9H611 641 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 SARS2Q9NP81 518 aaKnown RBP15.75■□□□□ 0.11
BRD9-208ENST00000489816 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.75■□□□□ 0.116e-8■■■■■ 32.8
BRD9-208ENST00000489816 VTI1BQ9UEU0 232 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 TLR6Q9Y2C9 796 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 FBP2O00757 339 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 SEPT4O43236 478 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 ADAMTS4O75173 837 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 FMO4P31512 558 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 ZNF235Q14590 738 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 ZNF549Q6P9A3 640 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 IFNEQ86WN2 208 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 PGAM4Q8N0Y7 254 aa15.75■□□□□ 0.11
BRD9-208ENST00000489816 TRPC4APQ8TEL6 797 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms