RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 NUDT18Q6ZVK8 323 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 TAOK1Q7L7X3 1001 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 SFTPA1Q8IWL2 248 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 PLCD3Q8N3E9 789 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 STYXQ8WUJ0 223 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 PPM1EQ8WY54 764 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 ECHDC3Q96DC8 303 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 SMIM14Q96QK8 99 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 PHF7Q9BWX1 381 aaPredicted RBP21.74■■□□□ 1.07
SMC4-221ENST00000489573 IARS2Q9NSE4 1012 aaKnown RBP21.74■■□□□ 1.07
SMC4-221ENST00000489573 TXNDC16Q9P2K2 825 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 KCTD3Q9Y597 815 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 REV3LO60673 3130 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 MUC22E2RYF6 1773 aaPredicted RBP21.74■■□□□ 1.07
SMC4-221ENST00000489573 A0A1W2PQ67 120 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 UGT2B4P06133 528 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 ABL2P42684 1182 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 SOX9P48436 509 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 ACVR1Q04771 509 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 ZNF234Q14588 700 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 LGSNQ5TDP6 509 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 PACS1Q6VY07 963 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 GDPD4Q6W3E5 623 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 TRABD2AQ86V40 505 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 EXOC3L1Q86VI1 746 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 MDGA1Q8NFP4 955 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 PTPRN2Q92932 1015 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 HLA-CQ95604 372 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 GUCD1Q96NT3 240 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 CPNE1Q99829 537 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 MAGEE1Q9HCI5 957 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 NSMCE4AQ9NXX6 385 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 WASF2Q9Y6W5 498 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 BRWD1Q9NSI6 2320 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 A0A0J9YYE9 177 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 C2orf81A6NN90 581 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 AURKAO14965 403 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 KRT37O76014 449 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 TRBC1P01850 177 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 CTPS1P17812 591 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 GP5P40197 560 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 ZNF140P52738 457 aaPredicted RBP21.73■■□□□ 1.07
SMC4-221ENST00000489573 THOC5Q13769 683 aaKnown RBP21.73■■□□□ 1.07
SMC4-221ENST00000489573 ZSWIM9Q86XI8 627 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 CNTN4Q8IWV2 1026 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 SUGP1Q8IWZ8 645 aaKnown RBP21.73■■□□□ 1.07
SMC4-221ENST00000489573 SRRM1Q8IYB3 904 aaKnown RBP21.73■■□□□ 1.07
SMC4-221ENST00000489573 ZNF366Q8N895 744 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 GRIN3AQ8TCU5 1115 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 MZB1Q8WU39 189 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 DNAJC1Q96KC8 554 aaKnown RBP21.73■■□□□ 1.07
SMC4-221ENST00000489573 SRPK1Q96SB4 655 aaKnown RBP21.73■■□□□ 1.07
SMC4-221ENST00000489573 AGAP2Q99490 1192 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 FAM167BQ9BTA0 163 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 TRABDQ9H4I3 376 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 MTG2Q9H4K7 406 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 SENP1Q9P0U3 644 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 IL36AQ9UHA7 158 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 PHTF1Q9UMS5 762 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 ZNF711Q9Y462 761 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 ACTL7BQ9Y614 415 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 PSAT1Q9Y617 370 aa21.73■■□□□ 1.07
SMC4-221ENST00000489573 EDDM13A0A1B0GTR0 161 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 FOXO6A8MYZ6 492 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 GOLGA8TH3BQL2 631 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 SLC7A4O43246 635 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 BUD23O43709 281 aaKnown RBP21.72■■□□□ 1.07
SMC4-221ENST00000489573 RPP40O75818 363 aaKnown RBP21.72■■□□□ 1.07
SMC4-221ENST00000489573 KRT38O76015 456 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 BMP1P13497 986 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 CNTFP26441 200 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 PRAMEP78395 509 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 PDE1BQ01064 536 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 HNRNPA1L2Q32P51 320 aaKnown RBP21.72■■□□□ 1.07
SMC4-221ENST00000489573 CNPY4Q8N129 248 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 NDUFAF2Q8N183 169 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 TTC30BQ8N4P2 665 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 ARFGAP2Q8N6H7 521 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 OR13C4Q8NGS5 318 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 SPOCK2Q92563 424 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 LRIG1Q96JA1 1093 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 P2RY13Q9BPV8 354 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 OSBPL1AQ9BXW6 950 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 TMEM245Q9H330 911 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 KCNK12Q9HB15 430 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 TRPV5Q9NQA5 729 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 THAP10Q9P2Z0 257 aaPredicted RBP21.72■■□□□ 1.07
SMC4-221ENST00000489573 LIMD1Q9UGP4 676 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 GGT7Q9UJ14 662 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 A0A0C4DFX4 3053 aa21.72■■□□□ 1.07
SMC4-221ENST00000489573 CAPN8A6NHC0 703 aa21.71■■□□□ 1.07
SMC4-221ENST00000489573 SIN3BO75182 1162 aa21.71■■□□□ 1.07
SMC4-221ENST00000489573 SLC4A1P02730 911 aa21.71■■□□□ 1.07
SMC4-221ENST00000489573 SNRPAP09012 282 aaKnown RBP21.71■■□□□ 1.07
SMC4-221ENST00000489573 ALPIP09923 528 aa21.71■■□□□ 1.07
SMC4-221ENST00000489573 LPOP22079 712 aaPredicted RBP21.71■■□□□ 1.07
SMC4-221ENST00000489573 ARSDP51689 593 aa21.71■■□□□ 1.07
SMC4-221ENST00000489573 PPP2R2AP63151 447 aa21.71■■□□□ 1.07
SMC4-221ENST00000489573 TMPRSS15P98073 1019 aa21.71■■□□□ 1.07
SMC4-221ENST00000489573 SERPINA13PQ6UXR4 307 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms