RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 HTR3DQ70Z44 454 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TAS1R1Q7RTX1 841 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TFAP2DQ7Z6R9 452 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TMEM173Q86WV6 379 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 DENND1CQ8IV53 801 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 FAM217AQ8IXS0 508 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ARHGAP24Q8N264 748 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 STK40Q8N2I9 435 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TTC9BQ8N6N2 239 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 DCAF4L2Q8NA75 395 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 KREMEN2Q8NCW0 462 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 GPR150Q8NGU9 434 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TTC8Q8TAM2 541 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TADA1Q96BN2 335 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 MRRFQ96E11 262 aaKnown RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 OXNAD1Q96HP4 312 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 FAR2Q96K12 515 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ASB2Q96Q27 587 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 RAB3IPQ96QF0 476 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 NUDCD1Q96RS6 583 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 GPR22Q99680 433 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 WDR83Q9BRX9 315 aaKnown RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ACE2Q9BYF1 805 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 SLC2A11Q9BYW1 496 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 LMAN2LQ9H0V9 348 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 MUC3BQ9H195 1237 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 MFSD1Q9H3U5 465 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 KIF9Q9HAQ2 790 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 POPDC3Q9HBV1 291 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 PFDN4Q9NQP4 134 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 SAR1AQ9NR31 198 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 FGFR1OP2Q9NVK5 253 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ZDHHC7Q9NXF8 308 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 KCNK4Q9NYG8 393 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 KIAA1522Q9P206 1035 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF212Q9UDV6 495 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 AGO1Q9UL18 857 aaKnown RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 APOBEC2Q9Y235 224 aaKnown RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ACOT9Q9Y305 439 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 MFHAS1Q9Y4C4 1052 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 NLRC5Q86WI3 1866 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 A0A1W2PPM1 405 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 C5orf67F2Z3F1 127 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 GPR37L1O60883 481 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SOCS5O75159 536 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SPAG7O75391 227 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SEC24AO95486 1093 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 GLP2RO95838 553 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 TBX18O95935 607 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 PEX11BO96011 259 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 IL2RAP01589 272 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 C1QAP02745 245 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CKMP06732 381 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 PYGLP06737 847 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 BPGMP07738 259 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 HMBSP08397 361 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 STMN1P16949 149 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CD9P21926 228 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 WEE1P30291 646 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CA8P35219 290 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 NNMTP40261 264 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CD86P42081 329 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 GRIA1P42261 906 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 LEPRP48357 1165 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 PLK1P53350 603 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 EPHA5P54756 1037 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 NRLP54845 237 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 RAB10P61026 200 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 ACVR1Q04771 509 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 USP10Q14694 798 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 TAF1AQ15573 450 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CRY1Q16526 586 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 PREPLQ4J6C6 727 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 ALFQ53S48 1182 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 OXLD1Q5BKU9 147 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 FAM133BQ5BKY9 247 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CERCAMQ5T4B2 595 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 LYPLAL1Q5VWZ2 237 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 NADSYN1Q6IA69 706 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 FSTL4Q6MZW2 842 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 FAM45BPQ6NSW5 357 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 UGT3A1Q6NUS8 523 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 FAM117BQ6P1L5 589 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 TRMT10BQ6PF06 316 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 LILRA6Q6PI73 481 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CERS6Q6ZMG9 384 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 RAPH1Q70E73 1250 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 TBC1D1Q86TI0 1168 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 PRPF39Q86UA1 669 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SLC22A9Q8IVM8 553 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 SUGP1Q8IWZ8 645 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 CHCHD4Q8N4Q1 142 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 MRPL43Q8N983 215 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 C2CD4AQ8NCU7 369 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 FAM45AQ8TCE6 357 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 USP33Q8TEY7 942 aa6.4□□□□□ -1.38
SF3A3-208ENST00000489537 PDCD6IPQ8WUM4 868 aaKnown RBP6.4□□□□□ -1.38
SF3A3-208ENST00000489537 BCL7CQ8WUZ0 217 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms