RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 CNGA3Q16281 694 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 TTMPQ5BVD1 217 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 PDPK2PQ6A1A2 396 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 GLT6D1Q7Z4J2 308 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 LRRC6Q86X45 466 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 ZSWIM9Q86XI8 627 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 SLC44A1Q8WWI5 657 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 LRIG1Q96JA1 1093 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 KLHL32Q96NJ5 620 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 OSBPL1AQ9BXW6 950 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 HEBP1Q9NRV9 189 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 C20orf96Q9NUD7 363 aaPredicted RBP20.97■□□□□ 0.95
SND1-214ENST00000489417 EURLQ9NYK6 297 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 PSMC3IPQ9P2W1 217 aaPredicted RBP20.97■□□□□ 0.95
SND1-214ENST00000489417 CTNNAL1Q9UBT7 734 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 RIMKLBQ9ULI2 386 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 PHTF1Q9UMS5 762 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 ARL5AQ9Y689 179 aa20.97■□□□□ 0.95
SND1-214ENST00000489417 A0A0J9YYE9 177 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 SIN3BO75182 1162 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 LEFTY1O75610 366 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 TRBC1P01850 177 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 BMP1P13497 986 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 PFKPQ01813 784 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 SMAD1Q15797 465 aaKnown RBP20.96■□□□□ 0.95
SND1-214ENST00000489417 ARSIQ5FYB1 569 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 C9orf64Q5T6V5 341 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 EMC10Q5UCC4 262 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 MARK2Q7KZI7 788 aaKnown RBP20.96■□□□□ 0.95
SND1-214ENST00000489417 KCNMB4Q86W47 210 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 STK40Q8N2I9 435 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 MDGA1Q8NFP4 955 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 DCAKDQ8WVC6 231 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 SPOCK2Q92563 424 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 PEX13Q92968 403 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 ATP6V1G3Q96LB4 118 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 MAGEE1Q9HCI5 957 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 IL1RAPL1Q9NZN1 696 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 SUN2Q9UH99 717 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 ZNF711Q9Y462 761 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 KCTD3Q9Y597 815 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 IKBKGQ9Y6K9 419 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 C5orf42Q9H799 3197 aa20.96■□□□□ 0.95
SND1-214ENST00000489417 ANTXRLA6NF34 631 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 LOC730098B7Z3J9 87 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 K7EQS6 105 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 NPC1O15118 1278 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 NARSO43776 548 aaKnown RBP20.95■□□□□ 0.95
SND1-214ENST00000489417 CTSLP07711 333 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 INHBAP08476 426 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 ALPIP09923 528 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 TFF2Q03403 129 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 ACVR1Q04771 509 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 TDGQ13569 410 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 PON2Q15165 354 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 TMED2Q15363 201 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 SKIDA1Q1XH10 827 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 ADGRD1Q6QNK2 874 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 SLC26A11Q86WA9 606 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 NDUFAF2Q8N183 169 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 TTC30BQ8N4P2 665 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 OR13J1Q8NGT2 312 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 STYXQ8WUJ0 223 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 OR8D1Q8WZ84 308 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 EZH1Q92800 747 aaPredicted RBP20.95■□□□□ 0.95
SND1-214ENST00000489417 SRPK1Q96SB4 655 aaKnown RBP20.95■□□□□ 0.95
SND1-214ENST00000489417 ACOX2Q99424 681 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 STMN4Q9H169 189 aaPredicted RBP20.95■□□□□ 0.95
SND1-214ENST00000489417 TRABDQ9H4I3 376 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 CACNA2D2Q9NY47 1150 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 ZFATQ9P243 1243 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 STON1Q9Y6Q2 735 aa20.95■□□□□ 0.95
SND1-214ENST00000489417 TSPAN11A1L157 253 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 CAPN8A6NHC0 703 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 C2orf81A6NN90 581 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 HMGB1P1B2RPK0 211 aaPredicted RBP20.95■□□□□ 0.94
SND1-214ENST00000489417 AURKAO14965 403 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 BUD23O43709 281 aaKnown RBP20.95■□□□□ 0.94
SND1-214ENST00000489417 RNF40O75150 1001 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 VAPBO95292 243 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 PRNPP04156 253 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 SRFP11831 508 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 GLULP15104 373 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 OAS2P29728 719 aaKnown RBP20.95■□□□□ 0.94
SND1-214ENST00000489417 ARCN1P48444 511 aaKnown RBP20.95■□□□□ 0.94
SND1-214ENST00000489417 ZNF140P52738 457 aaPredicted RBP20.95■□□□□ 0.94
SND1-214ENST00000489417 ENPP2Q13822 863 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 PTPRRQ15256 657 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 HSP90AA5PQ58FG0 334 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 BRAT1Q6PJG6 821 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 ZNF513Q8N8E2 541 aaPredicted RBP20.95■□□□□ 0.94
SND1-214ENST00000489417 MSANTD3Q96H12 275 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 DNAJC1Q96KC8 554 aaKnown RBP20.95■□□□□ 0.94
SND1-214ENST00000489417 ZDHHC4Q9NPG8 344 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 SLC2A4RGQ9NR83 387 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 TBK1Q9UHD2 729 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 ZNF180Q9UJW8 692 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 PPIL1Q9Y3C6 166 aa20.95■□□□□ 0.94
SND1-214ENST00000489417 SLC4A1P02730 911 aa20.94■□□□□ 0.94
SND1-214ENST00000489417 EPHX1P07099 455 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms