RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 EIF4A3P38919 411 aaKnown RBP7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 SYKP43405 635 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 STK19P49842 368 aaPredicted RBP7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 ZNF165P49910 485 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 RRADP55042 308 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 MAZP56270 477 aaKnown RBP7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 PTK2Q05397 1052 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 TFF3Q07654 80 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 CDC16Q13042 620 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 MAPK7Q13164 816 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 MYBPC3Q14896 1274 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 PITRM1Q5JRX3 1037 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 Q5PR19 223 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 MPP7Q5T2T1 576 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 SPECC1LQ69YQ0 1117 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 TADA2BQ86TJ2 420 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 ZSCAN30Q86W11 494 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 NT5DC4Q86YG4 428 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 CEP57L1Q8IYX8 460 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 ZNF557Q8N988 423 aaPredicted RBP7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 DNAAF3Q8N9W5 541 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 PPP4R1Q8TF05 950 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 COG1Q8WTW3 980 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 CA5BP1Q8WTZ4 195 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 NR4A3Q92570 626 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 TSACCQ96A04 125 aaPredicted RBP7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 AZIN2Q96A70 460 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 TIGD1Q96MW7 591 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 GPATCH1Q9BRR8 931 aaKnown RBP7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 MSTO1Q9BUK6 570 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 BHMT2Q9H2M3 363 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 DPEP3Q9H4B8 488 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 C17orf75Q9HAS0 396 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 IL17CQ9P0M4 197 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 RASAL2Q9UJF2 1139 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 KCNJ14Q9UNX9 436 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 SCML2Q9UQR0 700 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 MYH11P35749 1972 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 A0A1B0GVL5 298 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 A8MU76 341 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 MCF2LO15068 1137 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 IPO13O94829 963 aaKnown RBP7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 ZNF202O95125 648 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 UNC5CO95185 931 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 RASGRP1O95267 797 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 NDUFA10O95299 355 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 ADCY5O95622 1261 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 HOXD4P09016 255 aaPredicted RBP7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 IGFALSP35858 605 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 CHRNA4P43681 627 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 ACOT2P49753 483 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 CASP6P55212 293 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 DMPKQ09013 629 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 CCDC15Q0P6D6 951 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 KEAP1Q14145 624 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 ZNF169Q14929 603 aaPredicted RBP7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 KYNUQ16719 465 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 UBAP2Q5T6F2 1119 aaKnown RBP7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 RNF219Q5W0B1 726 aaPredicted RBP7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 GALNT17Q6IS24 598 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 PAQR9Q6ZVX9 377 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 FAM35AQ86V20 835 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 CDC20BQ86Y33 519 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 MFN1Q8IWA4 741 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 FMR1NBQ8N0W7 255 aaPredicted RBP7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 ARFGAP1Q8N6T3 406 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 ZMIZ2Q8NF64 920 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 FIBINQ8TAL6 211 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 BICD1Q96G01 975 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 Q96MF0 132 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 FEM1AQ9BSK4 669 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 RUSC1Q9BVN2 902 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 C1QTNF2Q9BXJ5 285 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 RNF32Q9H0A6 362 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 GOLPH3LQ9H4A5 285 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 LRTM1Q9HBL6 345 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 SLC24A3Q9HC58 644 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 C1GALT1Q9NS00 363 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 RASSF1Q9NS23 344 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 ARHGEF38Q9NXL2 777 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 TINAGQ9UJW2 476 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 MEMO1Q9Y316 297 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 WASF2Q9Y6W5 498 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 VWFP04275 2813 aa7.54□□□□□ -1.2
EXOSC3-206ENST00000489414 ABCA1O95477 2261 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 FAM237BA0A1B0GVD1 139 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 TRIM64A6NGJ6 449 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 TRIM64BA6NI03 449 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 PP2D1A8MPX8 630 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 HNRNPDLO14979 420 aaKnown RBP7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 ARHGEF9O43307 516 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 MT-ND3P03897 115 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 TPOP07202 933 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 CTSLP07711 333 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 PFKFB1P16118 471 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 SCNN1AP37088 669 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 LIG4P49917 911 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 NDUFA8P51970 172 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 VAV2P52735 878 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 EFEMP1Q12805 493 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms