RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 GSRP00390 522 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 PROCP04070 461 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 TGM2P21980 687 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 PRKCHP24723 683 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 LTBRP36941 435 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 ATP5OP48047 213 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 HCAR3P49019 387 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 NOMO1Q15155 1222 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 MMEL1Q495T6 779 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 PGM2L1Q6PCE3 622 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 MAVSQ7Z434 540 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 NPAS3Q8IXF0 933 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 DEPDC1BQ8WUY9 529 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 MPP4Q96JB8 637 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 PRICKLE1Q96MT3 831 aaPredicted RBP13.41□□□□□ -0.26
CHD1L-208ENST00000488864 LGMNQ99538 433 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 PREBQ9HCU5 417 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 PLK2Q9NYY3 685 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 G3BP2Q9UN86 482 aaKnown RBP13.41□□□□□ -0.26
CHD1L-208ENST00000488864 ARHGAP26Q9UNA1 814 aa13.41□□□□□ -0.26
CHD1L-208ENST00000488864 ZFP37Q9Y6Q3 630 aaPredicted RBP13.41□□□□□ -0.26
CHD1L-208ENST00000488864 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 CHADO15335 359 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 POU2F2P09086 479 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 SMIM18P0DKX4 95 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 DDX6P26196 483 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 VIPR2P41587 438 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 TRIP10Q15642 601 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 UNC5AQ6ZN44 842 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 TPGS1Q6ZTW0 290 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 P2RY11Q96G91 374 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 GAS2L1Q99501 681 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 ZYG11BQ9C0D3 744 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 CATSPERBQ9H7T0 1116 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 USP29Q9HBJ7 922 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 THAP1Q9NVV9 213 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 LSM7Q9UK45 103 aaKnown RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 H3BQ06 376 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 ZMPSTE24O75844 475 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 ASLP04424 464 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 ZFXP17010 805 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 HOXC13P31276 330 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 CRHR1P34998 444 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 FASTKD1Q53R41 847 aaKnown RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 TCHHL1Q5QJ38 904 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 TEDDM1Q5T9Z0 273 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 Q6ZNB5 142 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 HPS6Q86YV9 775 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 MPP5Q8N3R9 675 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 CCNYQ8ND76 341 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 DNAJC1Q96KC8 554 aaKnown RBP13.4□□□□□ -0.26
CHD1L-208ENST00000488864 LRRC3BQ96PB8 259 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 PCDHGB4Q9UN71 923 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 POMPQ9Y244 141 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 PCDHGB5Q9Y5G0 923 aa13.4□□□□□ -0.26
CHD1L-208ENST00000488864 H3BNX3 289 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 DFFAO00273 331 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 KCNN4O15554 427 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 SIN3BO75182 1162 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 PENKP01210 267 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-208ENST00000488864 CHN2P52757 468 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 NRG1Q02297 640 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-208ENST00000488864 FOLH1Q04609 750 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 ANKRD20A4Q4UJ75 823 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 ATAT1Q5SQI0 421 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 LGSNQ5TDP6 509 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 CES5AQ6NT32 575 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 SDCCAG8Q86SQ7 713 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-208ENST00000488864 PPP1R14CQ8TAE6 165 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 MYLIPQ8WY64 445 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 HIC2Q96JB3 615 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 S1PR5Q9H228 398 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 PNPOQ9NVS9 261 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 IGLV3-10A0A075B6K4 115 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 VILLO15195 856 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 BIRC5O15392 142 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 KRT34O76011 436 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 HOXB8P17481 243 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-208ENST00000488864 RBL1P28749 1068 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 SERPINB6P35237 376 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 ZNF135P52742 658 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-208ENST00000488864 COPAP53621 1224 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 BTKQ06187 659 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 PAFAH1B3Q15102 231 aaKnown RBP13.39□□□□□ -0.27
CHD1L-208ENST00000488864 FAM78AQ5JUQ0 283 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 VWA5B1Q5TIE3 1220 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 MBLAC2Q68D91 279 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 ARHGAP36Q6ZRI8 547 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 HTR3DQ70Z44 454 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 DEFB107AQ8IZN7 70 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 RTL3Q8N8U3 475 aaKnown RBP13.39□□□□□ -0.27
CHD1L-208ENST00000488864 RAB3IL1Q8TBN0 382 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 RSPRY1Q96DX4 576 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 KLC2Q9H0B6 622 aa13.39□□□□□ -0.27
CHD1L-208ENST00000488864 LINC00597Q9H2U6 94 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms