RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 ADH1AP07327 375 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 PIRTP0C851 137 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 HOXB8P17481 243 aaPredicted RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 HNRNPH1P31943 449 aaKnown RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 SLC8A1P32418 973 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 AVPR1AP37288 418 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CSKP41240 450 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CSNK1DP48730 415 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CLCN4P51793 760 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 ZNF140P52738 457 aaPredicted RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 LBX1P52954 281 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CDKN2DP55273 166 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 DNAJB13P59910 316 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 PRAMEP78395 509 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 TIAL1Q01085 375 aaKnown RBP eCLIP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 ZBTB16Q05516 673 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 SLC20A2Q08357 652 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 TRAF2Q12933 501 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 TUBB3Q13509 450 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 RIPK1Q13546 671 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 SEMA3AQ14563 771 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 TTC31Q49AM3 519 aaPredicted RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 RBM20Q5T481 1227 aaKnown RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 LRRC8EQ6NSJ5 796 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 MRNIPQ6NTE8 343 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 ZNF549Q6P9A3 640 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CYB5D1Q6P9G0 228 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 LINGO4Q6UY18 593 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 MAVSQ7Z434 540 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 SDCCAG8Q86SQ7 713 aaPredicted RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 LDB1Q86U70 411 aaPredicted RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 RNF135Q8IUD6 432 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 WDR75Q8IWA0 830 aaKnown RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 BBS7Q8IWZ6 715 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 APCDD1Q8J025 514 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 ELMOD1Q8N336 334 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 PNPLA1Q8N8W4 532 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 GPATCH11Q8N954 259 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 TDRD5Q8NAT2 981 aaKnown RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 OR13C4Q8NGS5 318 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 OR4L1Q8NH43 312 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 WFDC5Q8TCV5 224 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 PPP4R1Q8TF05 950 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 HEXDCQ8WVB3 486 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 ACDQ96AP0 544 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 RMDN1Q96DB5 314 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 TSPAN17Q96FV3 270 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 NSL1Q96IY1 281 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 LMLNQ96KR4 655 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 TCF12Q99081 682 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 TCF25Q9BQ70 676 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 MRPL57Q9BQC6 102 aaKnown RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CORO1BQ9BR76 489 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 ADGRE3Q9BY15 652 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 DRC3Q9H069 523 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 WWP1Q9H0M0 922 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 FAM96AQ9H5X1 160 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 STN1Q9H668 368 aaKnown RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 KLC4Q9NSK0 619 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 ARL8BQ9NVJ2 186 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 DNAJC28Q9NX36 388 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CPSF2Q9P2I0 782 aaKnown RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 VPS51Q9UID3 782 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 HAO1Q9UJM8 370 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 VPS28Q9UK41 221 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CORO1CQ9ULV4 474 aaPredicted RBP6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 CLEC4EQ9ULY5 219 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 ARHGAP26Q9UNA1 814 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 SORCS3Q9UPU3 1222 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 SH3BP1Q9Y3L3 701 aa6.76□□□□□ -1.33
RN7SL561P-201ENST00000488553 HTTP42858 3142 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 A0A1W2PRU2 124 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 TYW5A2RUC4 315 aaKnown RBP6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 LCHNA4D1U4 455 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 C2orf81A6NN90 581 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 K7ERQ8 282 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 SCAMP3O14828 347 aaKnown RBP6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 CCL16O15467 120 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 TLL1O43897 1013 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 NPHS1O60500 1241 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 MOSPD3O75425 235 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 CBX6O95503 412 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 FGF19O95750 216 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 HSPA4LO95757 839 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 GLUD1P00367 558 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 CKMP06732 381 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 SERPINA6P08185 405 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 RBP1P09455 135 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 LTA4HP09960 611 aaKnown RBP6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 KITP10721 976 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 MYL4P12829 197 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 GJA1P17302 382 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 PTPN2P17706 415 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 EN2P19622 333 aaPredicted RBP6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 OGNP20774 298 aaKnown RBP6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 LPOP22079 712 aaPredicted RBP6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 FDXRP22570 491 aa6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 DDX6P26196 483 aaKnown RBP eCLIP6.75□□□□□ -1.33
RN7SL561P-201ENST00000488553 TARSP26639 723 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms