RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 P3H1Q32P28 736 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 RABEPKQ7Z6M1 372 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 ALYREFQ86V81 257 aaKnown RBP15.82■□□□□ 0.12
C9orf3-219ENST00000488186 TRIM69Q86WT6 500 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 ZSWIM9Q86XI8 627 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 SYT12Q8IV01 421 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 PRELID2Q8N945 189 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 IPMKQ8NFU5 416 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 ATL2Q8NHH9 583 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 MLPHQ9BV36 600 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-219ENST00000488186 SUSD2Q9UGT4 822 aa15.82■□□□□ 0.12
C9orf3-219ENST00000488186 FEZ2Q9UHY8 353 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-219ENST00000488186 IGLON5A6NGN9 336 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 E7EVH7 732 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 KIF2AO00139 706 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-219ENST00000488186 SLC31A1O15431 190 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 PSMD3O43242 534 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 ELFN1P0C7U0 828 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 LIG3P49916 1009 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 GDF10P55107 478 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 WNT3AP56704 352 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 PPP2CBP62714 309 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 PPP2CAP67775 309 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 SEMG2Q02383 582 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 TMEM52BQ4KMG9 183 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 DENND2CQ68D51 928 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 C4orf22Q6V702 233 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 TAB3Q8N5C8 712 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-219ENST00000488186 CEP76Q8TAP6 659 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 PIH1D2Q8WWB5 315 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 SCRN2Q96FV2 425 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 SERAC1Q96JX3 654 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 C1QTNF7Q9BXJ2 289 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 SLC17A9Q9BYT1 436 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 AASDHPPTQ9NRN7 309 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.81■□□□□ 0.12
C9orf3-219ENST00000488186 PAK5Q9P286 719 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 B4GALT6Q9UBX8 382 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 GGT7Q9UJ14 662 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 DMTF1Q9Y222 760 aa15.81■□□□□ 0.12
C9orf3-219ENST00000488186 NUMA1Q14980 2115 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 ATXN2Q99700 1313 aaKnown RBP15.8■□□□□ 0.12
C9orf3-219ENST00000488186 A0A0J9YYE9 177 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 A0A1W2PPC4 97 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 PRR5-ARHGAP8B1AHC4 643 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 ANKRD66B4E2M5 251 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 FZD6O60353 706 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 PHF2O75151 1096 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 TM7SF2O76062 418 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 PAK4O96013 591 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-219ENST00000488186 TRBC1P01850 177 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 IGHV4-34P06331 123 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 AKT2P31751 481 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 VIPR1P32241 457 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 HNF1BP35680 557 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 COILP38432 576 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-219ENST00000488186 MPLP40238 635 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 GRIA4P48058 902 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 GALNT3Q14435 633 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 STAT4Q14765 748 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 PLA2G2CQ5R387 149 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 PEAR1Q5VY43 1037 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-219ENST00000488186 SEL1L3Q68CR1 1132 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 CCDC137Q6PK04 289 aaKnown RBP15.8■□□□□ 0.12
C9orf3-219ENST00000488186 NYAP1Q6ZVC0 841 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 DPPA4Q7L190 304 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 SLC25A41Q8N5S1 370 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 GRK7Q8WTQ7 553 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 DNASE2BQ8WZ79 361 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 SPOCK2Q92563 424 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 SKA1Q96BD8 255 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 RTP4Q96DX8 246 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 PILRBQ9UKJ0 227 aa15.8■□□□□ 0.12
C9orf3-219ENST00000488186 ANKRD36A6QL64 1941 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 A0A1B0GTW7 788 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 C10orf142B7Z368 130 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 PRAMEF26H0Y7S4 382 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 BCAT2O15382 392 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-219ENST00000488186 NDST3O95803 873 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 PRLP01236 227 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 CFIP05156 583 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 ALPIP09923 528 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 ETS1P14921 441 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 TGM1P22735 817 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 FDFT1P37268 417 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 MMP12P39900 470 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 IHHQ14623 411 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 ACOX1Q15067 660 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 TEAD4Q15561 434 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 CSRP2Q16527 193 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 DUOXA1Q1HG43 343 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 ZNF284Q2VY69 593 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 CREG2Q8IUH2 290 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 ZCCHC9Q8N567 271 aaKnown RBP15.79■□□□□ 0.12
C9orf3-219ENST00000488186 C12orf50Q8NA57 414 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-219ENST00000488186 CCHCR1Q8TD31 782 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 TADA1Q96BN2 335 aa15.79■□□□□ 0.12
C9orf3-219ENST00000488186 OXNAD1Q96HP4 312 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-219ENST00000488186 SRPK1Q96SB4 655 aaKnown RBP15.79■□□□□ 0.12
C9orf3-219ENST00000488186 FICDQ9BVA6 458 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms