RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CILP2Q8IUL8 1156 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 MFSD6LQ8IWD5 586 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 AHI1Q8N157 1196 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 OR13C4Q8NGS5 318 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 OR6K2Q8NGY2 324 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 BPIFB1Q8TDL5 484 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 PIH1D2Q8WWB5 315 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 HDAC10Q969S8 669 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 ATXN7L3BQ96GX2 97 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 SMIM14Q96QK8 99 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 SLC13A1Q9BZW2 595 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 IQCGQ9H095 443 aaKnown RBP9.48□□□□□ -0.89
SF3B1-211ENST00000487698 VPS11Q9H270 941 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 TNKS2Q9H2K2 1166 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 EVLQ9UI08 416 aaPredicted RBP9.48□□□□□ -0.89
SF3B1-211ENST00000487698 SLC25A13Q9UJS0 675 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 RPL26L1Q9UNX3 145 aaKnown RBP9.48□□□□□ -0.89
SF3B1-211ENST00000487698 BRWD1Q9NSI6 2320 aa9.48□□□□□ -0.89
SF3B1-211ENST00000487698 TCP11X1B4DZS4 312 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 TRIM24O15164 1050 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 GLRA3O75311 464 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 TOP3BO95985 862 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ADH1CP00326 375 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 CISD3P0C7P0 127 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ADH5P11766 374 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 TYK2P29597 1187 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 SLC8A1P32418 973 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 LEPRP48357 1165 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 POLD2P49005 469 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 PRAMEP78395 509 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ECT2LQ008S8 904 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 DMTNQ08495 405 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 GAB4Q2WGN9 574 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ARMC12Q5T9G4 340 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 TRIM68Q6AZZ1 485 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 GLT6D1Q7Z4J2 308 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ETFBKMTQ8IXQ9 262 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 TTC30BQ8N4P2 665 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 PCDH20Q8N6Y1 951 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 GPR150Q8NGU9 434 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 TBATAQ96M53 351 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 TUBGCP5Q96RT8 1024 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 PAIP2Q9BPZ3 127 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 APOL5Q9BWW9 433 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 FAM107BQ9H098 131 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 HACD3Q9P035 362 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 MARCH4Q9P2E8 410 aaPredicted RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 EMCNQ9ULC0 261 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 PCDHB9Q9Y5E1 797 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 C5orf42Q9H799 3197 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 CCDC162PA2VCL2 907 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ERICH4A6NGS2 130 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 OR51F1A6NGY5 319 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 BUD23O43709 281 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 PIGNO95427 931 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 BMP1P13497 986 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 CD151P48509 253 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 SERPINB4P48594 390 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 VASPP50552 380 aaPredicted RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 SNRPD1P62314 119 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 BCL2L1Q07817 233 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 DLG2Q15700 870 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ZKSCAN8Q15776 578 aaPredicted RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ZSCAN26Q16670 478 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 GEN1Q17RS7 908 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 INSCQ1MX18 579 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF789Q5FWF6 425 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 PPM1JQ5JR12 505 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 MBLAC2Q68D91 279 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 FOXR1Q6PIV2 292 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 KYAT3Q6YP21 454 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 PTAR1Q7Z6K3 402 aaPredicted RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 C12orf40Q86WS4 652 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 GABPB2Q8TAK5 448 aaPredicted RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 PDCD6IPQ8WUM4 868 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 CABS1Q96KC9 395 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 MRGPRX3Q96LB0 322 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 FAM83CQ9BQN1 747 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 ATP13A3Q9H7F0 1226 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 CAB39LQ9H9S4 337 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 FGFR1OP2Q9NVK5 253 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 SLCO3A1Q9UIG8 710 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 SLC27A6Q9Y2P4 619 aa9.47□□□□□ -0.89
SF3B1-211ENST00000487698 TCF20Q9UGU0 1960 aaKnown RBP9.47□□□□□ -0.89
SF3B1-211ENST00000487698 FAM95CA0A1B0GW59 222 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 C2orf81A6NN90 581 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 HEPACAM2A8MVW5 462 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 HAUS5O94927 633 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 NFATC1O95644 943 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 S1PR4O95977 384 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 GOT2P00505 430 aaKnown RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 MPOP05164 745 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 C2P06681 752 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 GSTA1P08263 222 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 VIMP08670 466 aaKnown RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 ARSAP15289 507 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 HOXB8P17481 243 aaPredicted RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 LPOP22079 712 aaPredicted RBP9.46□□□□□ -0.89
SF3B1-211ENST00000487698 GKP32189 559 aa9.46□□□□□ -0.89
SF3B1-211ENST00000487698 ADAM15Q13444 863 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms