RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 CFAP58Q5T655 872 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 ERAP2Q6P179 960 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 SCYL2Q6P3W7 929 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 BRAT1Q6PJG6 821 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 ZNF605Q86T29 641 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 HID1Q8IV36 788 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 ANKRD20A12PQ8NF67 263 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 NEK11Q8NG66 645 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 ATL2Q8NHH9 583 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 LIN37Q96GY3 246 aaPredicted RBP8.61□□□□□ -1.03
PRKCB-208ENST00000487674 PCMTD1Q96MG8 357 aaPredicted RBP8.61□□□□□ -1.03
PRKCB-208ENST00000487674 ZNF641Q96N77 438 aaPredicted RBP8.61□□□□□ -1.03
PRKCB-208ENST00000487674 TUBGCP5Q96RT8 1024 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 EDEM3Q9BZQ6 932 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 SYNDIG1Q9H7V2 258 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 PDFQ9HBH1 243 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 PCDH12Q9NPG4 1184 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 SEPT11Q9NVA2 429 aaKnown RBP8.61□□□□□ -1.03
PRKCB-208ENST00000487674 DONSONQ9NYP3 566 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 UBA2Q9UBT2 640 aaPredicted RBP8.61□□□□□ -1.03
PRKCB-208ENST00000487674 FZD10Q9ULW2 581 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 ATP8A1Q9Y2Q0 1164 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 COQ6Q9Y2Z9 468 aa8.61□□□□□ -1.03
PRKCB-208ENST00000487674 SETXQ7Z333 2677 aaKnown RBP8.61□□□□□ -1.03
PRKCB-208ENST00000487674 PMS2P1A4D2B8 440 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 EIF3CLB5ME19 914 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 D6RAR5 112 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 PRAMEF11O60813 436 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 WFS1O76024 890 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 TNFSF15O95150 251 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 CTSEP14091 401 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 NDST2P52849 883 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 COPB1P53618 953 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 SRP54P61011 504 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 RPL7AP62424 266 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 EIF3IQ13347 325 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 MTM1Q13496 603 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 INPP5AQ14642 412 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 CYTH1Q15438 398 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 DCUN1D2Q6PH85 259 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 FOXR1Q6PIV2 292 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 RBM43Q6ZSC3 357 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 GKN2Q86XP6 184 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 NETO2Q8NC67 525 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 OR6C4Q8NGE1 309 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 TTC9Q92623 222 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 TSACCQ96A04 125 aaPredicted RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 CCDC74AQ96AQ1 378 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 PDXPQ96GD0 296 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 WDR92Q96MX6 357 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 EIF3CQ99613 913 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 AGPAT1Q99943 283 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 APOOQ9BUR5 198 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 SUV39H2Q9H5I1 410 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 LRRC19Q9H756 370 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 ATP13A3Q9H7F0 1226 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 FANCLQ9NW38 375 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 SIRPGQ9P1W8 387 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 GULP1Q9UBP9 304 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 KLQ9UEF7 1012 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 LIMA1Q9UHB6 759 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 GPR34Q9UPC5 381 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 OR1A2Q9Y585 309 aa8.6□□□□□ -1.03
PRKCB-208ENST00000487674 ASH1LQ9NR48 2969 aaKnown RBP8.6□□□□□ -1.03
PRKCB-208ENST00000487674 SCN8AQ9UQD0 1980 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 AHCTF1Q8WYP5 2266 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 ATMQ13315 3056 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 CFAP69A5D8W1 941 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 ARHGAP42A6NI28 874 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 TMX2-CTNND1H3BSU7 103 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 K7ENP7 123 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 PLD2O14939 933 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 CASC3O15234 703 aaKnown RBP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 PCCBP05166 539 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 RPLP0P05388 317 aaKnown RBP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 CCDC172P0C7W6 258 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 SERPINA4P29622 427 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 CCKBRP32239 447 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 CSNK1DP48730 415 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 LIG3P49916 1009 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 KIAA1024LP59773 190 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 MYL5Q02045 173 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 OGDHQ02218 1023 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 CLN3Q13286 438 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 PPP1R2P3Q6NXS1 205 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 INO80CQ6PI98 192 aaPredicted RBP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 ENPP7Q6UWV6 458 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 RD3Q7Z3Z2 195 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 B3GNT8Q7Z7M8 397 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 ZSWIM9Q86XI8 627 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 CAMK1DQ8IU85 385 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 MCOLN2Q8IZK6 566 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 CELF6Q96J87 481 aaKnown RBP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 GFM1Q96RP9 751 aaKnown RBP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 ERGIC2Q96RQ1 377 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 RBM15Q96T37 977 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 STRADBQ9C0K7 418 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms