RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 ACSL6Q9UKU0 697 aa16.29■□□□□ 0.2
SRRT-212ENST00000487311 SIK3Q9Y2K2 1263 aa16.29■□□□□ 0.2
SRRT-212ENST00000487311 DGKBQ9Y6T7 804 aa16.29■□□□□ 0.2
SRRT-212ENST00000487311 RNF215Q9Y6U7 377 aa16.29■□□□□ 0.2
SRRT-212ENST00000487311 ANKRD36A6QL64 1941 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 RECQL5O94762 991 aaPredicted RBP16.28■□□□□ 0.2
SRRT-212ENST00000487311 WT1P19544 449 aaPredicted RBP16.28■□□□□ 0.2
SRRT-212ENST00000487311 MMP12P39900 470 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 STAT1P42224 750 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 NSFP46459 744 aaKnown RBP16.28■□□□□ 0.2
SRRT-212ENST00000487311 NFATC3Q12968 1075 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 EIF3IQ13347 325 aaKnown RBP16.28■□□□□ 0.2
SRRT-212ENST00000487311 PPP1R15BQ5SWA1 713 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 LIPIQ6XZB0 460 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 MON1BQ7L1V2 547 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 TAF8Q7Z7C8 310 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 TSEN2Q8NCE0 465 aaKnown RBP16.28■□□□□ 0.2
SRRT-212ENST00000487311 FAM46DQ8NEK8 389 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 EXTL1Q92935 676 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 ZNF641Q96N77 438 aaPredicted RBP16.28■□□□□ 0.2
SRRT-212ENST00000487311 TMEM74Q96NL1 305 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 STRADBQ9C0K7 418 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 CLMPQ9H6B4 373 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 CATSPERBQ9H7T0 1116 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 APPL1Q9UKG1 709 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 ATP8A1Q9Y2Q0 1164 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 LOXL2Q9Y4K0 774 aa16.28■□□□□ 0.2
SRRT-212ENST00000487311 PRAMEF33A0A0G2JMD5 474 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 A8MX80 341 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 TMX2-CTNND1H3BSU7 103 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 NVLO15381 856 aaKnown RBP16.27■□□□□ 0.2
SRRT-212ENST00000487311 B4GAT1O43505 415 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 PRAMEF10O60809 474 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 PRAMEF11O60813 436 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 WISP1O95388 367 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 FUCA1P04066 466 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 JMJD7P0C870 316 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 GLB1P16278 677 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 ITGB6P18564 788 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 PAPOLAP51003 745 aaKnown RBP16.27■□□□□ 0.2
SRRT-212ENST00000487311 NFKB2Q00653 900 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 MTM1Q13496 603 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 CA9Q16790 459 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 CERCAMQ5T4B2 595 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 CDKAL1Q5VV42 579 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 BRAT1Q6PJG6 821 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 USP53Q70EK8 1073 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 SRLQ86TD4 932 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 ZFAND4Q86XD8 727 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 OR6C4Q8NGE1 309 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 OR56A4Q8NGH8 313 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 ENOX1Q8TC92 643 aaKnown RBP16.27■□□□□ 0.2
SRRT-212ENST00000487311 USP7Q93009 1102 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 SGF29Q96ES7 293 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 MCEEQ96PE7 176 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 SEMA6CQ9H3T2 930 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 FOXJ2Q9P0K8 574 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 LRIT1Q9P2V4 623 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 DACH1Q9UI36 760 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 AHCTF1Q8WYP5 2266 aa16.27■□□□□ 0.2
SRRT-212ENST00000487311 C9orf172C9J069 976 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 CALB1P05937 261 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 TRIM23P36406 574 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 CYP4F2P78329 520 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 B4GALNT1Q00973 533 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 HLTFQ14527 1009 aaKnown RBP eCLIP16.26■□□□□ 0.19
SRRT-212ENST00000487311 GRM3Q14832 879 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 ERAP2Q6P179 960 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 ARHGAP36Q6ZRI8 547 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 PRICKLE2Q7Z3G6 844 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 SPRED1Q7Z699 444 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 VASH2Q86V25 355 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 TP53INP2Q8IXH6 220 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 ARFGAP1Q8N6T3 406 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 ECHDC3Q96DC8 303 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 TUBGCP5Q96RT8 1024 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 TRIM4Q9C037 500 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 SPATS2LQ9NUQ6 558 aaKnown RBP16.26■□□□□ 0.19
SRRT-212ENST00000487311 MYO18BQ8IUG5 2567 aa16.26■□□□□ 0.19
SRRT-212ENST00000487311 ARHGEF17Q96PE2 2063 aaPredicted RBP16.25■□□□□ 0.19
SRRT-212ENST00000487311 TTC24A2A3L6 582 aaPredicted RBP16.25■□□□□ 0.19
SRRT-212ENST00000487311 CFAP69A5D8W1 941 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 B4DGG1 531 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 TRAFD1O14545 582 aaPredicted RBP16.25■□□□□ 0.19
SRRT-212ENST00000487311 PALMO75781 387 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 LIPCP11150 499 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 PNLIPP16233 465 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 CSNK1DP48730 415 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 NDST2P52849 883 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 TPI1P60174 286 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 SYCP1Q15431 976 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 C14orf28Q4W4Y0 310 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 AFMIDQ63HM1 303 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 DNAJC24Q6P3W2 148 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 SLITRK4Q8IW52 837 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 ARHGAP12Q8IWW6 846 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 AGPAT1Q99943 283 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 CNPY3Q9BT09 278 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 NUP62CLQ9H1M0 184 aa16.25■□□□□ 0.19
SRRT-212ENST00000487311 DPEP2Q9H4A9 486 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms