RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TMEM52BQ4KMG9 183 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 COBLL1Q53SF7 1204 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 ZNF658Q5TYW1 1059 aaPredicted RBP7.7□□□□□ -1.18
PDPN-205ENST00000487038 ANKS6Q68DC2 871 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 C16orf46Q6P387 395 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 OLFML1Q6UWY5 402 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 KRBA2Q6ZNG9 492 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 ASB18Q6ZVZ8 466 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 ENOSF1Q7L5Y1 443 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 MAMDC2Q7Z304 686 aaPredicted RBP7.7□□□□□ -1.18
PDPN-205ENST00000487038 ZNF438Q7Z4V0 828 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 ZNF354CQ86Y25 554 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 TICAM1Q8IUC6 712 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 ARHGEF19Q8IW93 802 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 FAM114A1Q8IWE2 563 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 SMYD4Q8IYR2 804 aaPredicted RBP7.7□□□□□ -1.18
PDPN-205ENST00000487038 C1orf131Q8NDD1 294 aaKnown RBP7.7□□□□□ -1.18
PDPN-205ENST00000487038 ZNF397Q8NF99 534 aaPredicted RBP7.7□□□□□ -1.18
PDPN-205ENST00000487038 CPT1CQ8TCG5 803 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 ZDHHC1Q8WTX9 485 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 CASKIN2Q8WXE0 1202 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 PMEPA1Q969W9 287 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 CPXM1Q96SM3 734 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 NPY6RQ99463 290 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 GSDMCQ9BYG8 508 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 SLC29A3Q9BZD2 475 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 GTPBP4Q9BZE4 634 aaKnown RBP7.7□□□□□ -1.18
PDPN-205ENST00000487038 RETREG1Q9H6L5 497 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDPN-205ENST00000487038 PPARGC1AQ9UBK2 798 aaKnown RBP7.7□□□□□ -1.18
PDPN-205ENST00000487038 RCOR1Q9UKL0 485 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 CNTN6Q9UQ52 1028 aa7.7□□□□□ -1.18
PDPN-205ENST00000487038 ADGRG4Q8IZF6 3080 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 CCDC168Q8NDH2 2452 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 LOC101059948A0A1B0GTJ6 334 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 TNFRSF10CO14798 259 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 B4GAT1O43505 415 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 CCNB1P14635 433 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 TIMP2P16035 220 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 STAT1P42224 750 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 PRCPP42785 496 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 NDUFA8P51970 172 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 MAZP56270 477 aaKnown RBP7.69□□□□□ -1.18
PDPN-205ENST00000487038 RHOAP61586 193 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 GPLD1P80108 840 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 RAPGEF1Q13905 1077 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 SLC25A52Q3SY17 297 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 OTUD1Q5VV17 481 aaPredicted RBP7.69□□□□□ -1.18
PDPN-205ENST00000487038 ANKRD40Q6AI12 368 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 ZNF787Q6DD87 383 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 TMEM71Q6P5X7 295 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 ESX1Q8N693 406 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 EHBP1Q8NDI1 1231 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 HCAR2Q8TDS4 363 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 OR1E3Q8WZA6 343 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 RTP4Q96DX8 246 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 MOCOSQ96EN8 888 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 HMCESQ96FZ2 354 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 AHCYL2Q96HN2 611 aaKnown RBP7.69□□□□□ -1.18
PDPN-205ENST00000487038 SPATA32Q96LK8 384 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 KREMEN1Q96MU8 473 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 TTYH3Q9C0H2 523 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 TMEM168Q9H0V1 697 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 MAGEH1Q9H213 219 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 WDR26Q9H7D7 661 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 CYP4F12Q9HCS2 524 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 FGF22Q9HCT0 170 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 MRPL40Q9NQ50 206 aaKnown RBP7.69□□□□□ -1.18
PDPN-205ENST00000487038 PCDHGC3Q9UN70 934 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 POLHQ9Y253 713 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 SNX10Q9Y5X0 201 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 ACTL7AQ9Y615 435 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 KCNMB2Q9Y691 235 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 ZFHX3Q15911 3703 aa7.69□□□□□ -1.18
PDPN-205ENST00000487038 PRSS38A1L453 326 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 CFAP69A5D8W1 941 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 TRIM49BA6NDI0 452 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 TMEM202A6NGA9 273 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 PSMA7O14818 248 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 RAMP2O60895 175 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 TMCC1O94876 653 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 CD160O95971 181 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 ERBB2P04626 1255 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 HSP90AA1P07900 732 aaKnown RBP7.68□□□□□ -1.18
PDPN-205ENST00000487038 HOXC4P09017 264 aaPredicted RBP7.68□□□□□ -1.18
PDPN-205ENST00000487038 NR1D1P20393 614 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 CD1CP29017 333 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 ACVRL1P37023 503 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 DCTP40126 519 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 USP8P40818 1118 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 PPP1R2P41236 205 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 LIG3P49916 1009 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 RNASE9P60153 205 aaKnown RBP7.68□□□□□ -1.18
PDPN-205ENST00000487038 DNM1Q05193 864 aaKnown RBP7.68□□□□□ -1.18
PDPN-205ENST00000487038 MAP7Q14244 749 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 NAA30Q147X3 362 aaPredicted RBP7.68□□□□□ -1.18
PDPN-205ENST00000487038 UGP2Q16851 508 aa7.68□□□□□ -1.18
PDPN-205ENST00000487038 ATXN7L2Q5T6C5 722 aaPredicted RBP7.68□□□□□ -1.18
PDPN-205ENST00000487038 BRAT1Q6PJG6 821 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms