RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 UBFD1O14562 309 aaKnown RBP12.38□□□□□ -0.43
PTCD2-204ENST00000486995 LDB2O43679 373 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 GJB3O75712 270 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 PDK3Q15120 406 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 FAM26DQ5JW98 314 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 GPR158Q5T848 1215 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-204ENST00000486995 ISCA2Q86U28 154 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 GPR152Q8TDT2 470 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 DCUN1D1Q96GG9 259 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 FUBP3Q96I24 572 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTCD2-204ENST00000486995 GSTO2Q9H4Y5 243 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 BCAP29Q9UHQ4 241 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 IMPDH1P20839 514 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 ATXN3P54252 364 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-204ENST00000486995 ADGRE1Q14246 886 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 CLLU1OSQ5K130 101 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 UGT2A3Q6UWM9 527 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 CYHR1Q6ZMK1 362 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 ZNF354CQ86Y25 554 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 TICAM1Q8IUC6 712 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 TMEM126BQ8IUX1 230 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 SLC22A9Q8IVM8 553 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 COLGALT2Q8IYK4 626 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 TTC9BQ8N6N2 239 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 FAM156AQ8NDB6 213 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 KLHDC9Q8NEP7 349 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 KLHL32Q96NJ5 620 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 MRPL1Q9BYD6 325 aaKnown RBP12.38□□□□□ -0.43
PTCD2-204ENST00000486995 ALG9Q9H6U8 611 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 COPS7BQ9H9Q2 264 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-204ENST00000486995 TRPC7Q9HCX4 862 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 PAPOLBQ9NRJ5 636 aaKnown RBP12.38□□□□□ -0.43
PTCD2-204ENST00000486995 RGS18Q9NS28 235 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 IL37Q9NZH6 218 aa12.38□□□□□ -0.43
PTCD2-204ENST00000486995 MYO16Q9Y6X6 1858 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 BRCA2P51587 3418 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PRSS51A0A1B0GVH4 220 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 DRGXA6NNA5 263 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 FBP2O00757 339 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 UBDO15205 165 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 DENRO43583 198 aaKnown RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 TCN1P20061 433 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 ETFBP38117 255 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 SLC26A3P40879 764 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 INHBCP55103 352 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PSME3P61289 254 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 LRP8Q14114 963 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PTK2BQ14289 1009 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 TLR1Q15399 786 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 NFE2Q16621 373 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 GLB1LQ6UWU2 654 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PIM3Q86V86 326 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 ARHGAP18Q8N392 663 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PCDH20Q8N6Y1 951 aaKnown RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 ATP6V0D2Q8N8Y2 350 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 ATAD1Q8NBU5 361 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 DLG3Q92796 817 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 BTN2A3PQ96KV6 586 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 TBATAQ96M53 351 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 LRGUKQ96M69 825 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 CRYL1Q9Y2S2 319 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 TRAF6Q9Y4K3 522 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 EME2A4GXA9 379 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 TMEM189-UBE2V1I3L0A0 370 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 TRIM38O00635 465 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 TXNDC9O14530 226 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 DNAJA2O60884 412 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 CAPNS1P04632 268 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 HDCP19113 662 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 GRIA2P42262 883 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 OR1G1P47890 313 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PSMD8P48556 350 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PRAMEP78395 509 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 TIAL1Q01085 375 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 SQLEQ14534 574 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 POLD3Q15054 466 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 ZNF678Q5SXM1 525 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 SLC30A9Q6PML9 568 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 CIR1Q86X95 450 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 MIB1Q86YT6 1006 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 ST13P4Q8IZP2 240 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PKP2Q99959 881 aa12.37□□□□□ -0.43
PTCD2-204ENST00000486995 PRG3Q9Y2Y8 225 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-204ENST00000486995 DOCK4Q8N1I0 1966 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 FAM92AA1XBS5 289 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 E7ENX8 843 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
PTCD2-204ENST00000486995 MUSKO15146 869 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 SOAT2O75908 522 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 PENKP01210 267 aaPredicted RBP12.36□□□□□ -0.43
PTCD2-204ENST00000486995 TSPAN8P19075 237 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 FLT3LGP49771 235 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 CHN2P52757 468 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 ACVR1Q04771 509 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 IL10RBQ08334 325 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 STX5Q13190 355 aa12.36□□□□□ -0.43
PTCD2-204ENST00000486995 SERINC3Q13530 473 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms