RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CDH18Q13634 790 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 RCN2Q14257 317 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 MPPE1Q53F39 396 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 FBXW10Q5XX13 1052 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 RETSATQ6NUM9 610 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 FAM117BQ6P1L5 589 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 NCEH1Q6PIU2 408 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 CNSTQ6PJW8 725 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 UBE2Q1Q7Z7E8 422 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 SDCCAG8Q86SQ7 713 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 CEP97Q8IW35 865 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 TNS4Q8IZW8 715 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 FSTL5Q8N475 847 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 KIAA1958Q8N8K9 716 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 ARL14EPQ8N8R7 260 aaPredicted RBP12.01□□□□□ -0.49
PKP4-213ENST00000486254 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 KCTD4Q8WVF5 259 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 AUTS2Q8WXX7 1259 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 WBP2Q969T9 261 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 NSL1Q96IY1 281 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 RAD9AQ99638 391 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 CATSPERZQ9NTU4 200 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 MRGBPQ9NV56 204 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 ZNF358Q9NW07 568 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 VWA7Q9Y334 891 aa12.01□□□□□ -0.49
PKP4-213ENST00000486254 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12□□□□□ -0.49
PKP4-213ENST00000486254 E2F8A0AVK6 867 aa12□□□□□ -0.49
PKP4-213ENST00000486254 CCDC78A2IDD5 438 aa12□□□□□ -0.49
PKP4-213ENST00000486254 TK2O00142 265 aa12□□□□□ -0.49
PKP4-213ENST00000486254 PFDN6O15212 129 aa12□□□□□ -0.49
PKP4-213ENST00000486254 SLC22A2O15244 555 aa12□□□□□ -0.49
PKP4-213ENST00000486254 CD3EAPO15446 510 aaKnown RBP12□□□□□ -0.49
PKP4-213ENST00000486254 FZD6O60353 706 aa12□□□□□ -0.49
PKP4-213ENST00000486254 SOCS5O75159 536 aa12□□□□□ -0.49
PKP4-213ENST00000486254 GLUD1P00367 558 aa12□□□□□ -0.49
PKP4-213ENST00000486254 C8AP07357 584 aa12□□□□□ -0.49
PKP4-213ENST00000486254 IRF1P10914 325 aa12□□□□□ -0.49
PKP4-213ENST00000486254 TCF3P15923 654 aa12□□□□□ -0.49
PKP4-213ENST00000486254 FDXRP22570 491 aa12□□□□□ -0.49
PKP4-213ENST00000486254 TARSP26639 723 aaKnown RBP12□□□□□ -0.49
PKP4-213ENST00000486254 ABCG1P45844 678 aa12□□□□□ -0.49
PKP4-213ENST00000486254 RGRP47804 291 aa12□□□□□ -0.49
PKP4-213ENST00000486254 GRIA4P48058 902 aa12□□□□□ -0.49
PKP4-213ENST00000486254 NUMBP49757 651 aa12□□□□□ -0.49
PKP4-213ENST00000486254 SCNN1BP51168 640 aa12□□□□□ -0.49
PKP4-213ENST00000486254 ADARP55265 1226 aaKnown RBP12□□□□□ -0.49
PKP4-213ENST00000486254 NAA20P61599 178 aa12□□□□□ -0.49
PKP4-213ENST00000486254 KCNJ2P63252 427 aa12□□□□□ -0.49
PKP4-213ENST00000486254 IRX4P78413 519 aa12□□□□□ -0.49
PKP4-213ENST00000486254 NFKB2Q00653 900 aa12□□□□□ -0.49
PKP4-213ENST00000486254 TUBB3Q13509 450 aa12□□□□□ -0.49
PKP4-213ENST00000486254 ACAP2Q15057 778 aa12□□□□□ -0.49
PKP4-213ENST00000486254 TECRLQ5HYJ1 363 aa12□□□□□ -0.49
PKP4-213ENST00000486254 HECTD2Q5U5R9 776 aa12□□□□□ -0.49
PKP4-213ENST00000486254 TXNDC8Q6A555 127 aa12□□□□□ -0.49
PKP4-213ENST00000486254 C16orf59Q7L2K0 433 aa12□□□□□ -0.49
PKP4-213ENST00000486254 KDELC2Q7Z4H8 507 aa12□□□□□ -0.49
PKP4-213ENST00000486254 TMCO2Q7Z6W1 182 aaPredicted RBP12□□□□□ -0.49
PKP4-213ENST00000486254 SLC22A9Q8IVM8 553 aa12□□□□□ -0.49
PKP4-213ENST00000486254 PARP9Q8IXQ6 854 aa12□□□□□ -0.49
PKP4-213ENST00000486254 GPATCH11Q8N954 259 aa12□□□□□ -0.49
PKP4-213ENST00000486254 KLHL23Q8NBE8 558 aa12□□□□□ -0.49
PKP4-213ENST00000486254 KREMEN2Q8NCW0 462 aa12□□□□□ -0.49
PKP4-213ENST00000486254 OR6P1Q8NGX9 317 aa12□□□□□ -0.49
PKP4-213ENST00000486254 OR4L1Q8NH43 312 aa12□□□□□ -0.49
PKP4-213ENST00000486254 BLOC1S5Q8TDH9 187 aa12□□□□□ -0.49
PKP4-213ENST00000486254 DNAJC1Q96KC8 554 aaKnown RBP12□□□□□ -0.49
PKP4-213ENST00000486254 SLC22A12Q96S37 553 aa12□□□□□ -0.49
PKP4-213ENST00000486254 TRMOQ9BU70 441 aa12□□□□□ -0.49
PKP4-213ENST00000486254 GATA5Q9BWX5 397 aaPredicted RBP12□□□□□ -0.49
PKP4-213ENST00000486254 NMUR2Q9GZQ4 415 aa12□□□□□ -0.49
PKP4-213ENST00000486254 ILKAPQ9H0C8 392 aaPredicted RBP12□□□□□ -0.49
PKP4-213ENST00000486254 CDH19Q9H159 772 aa12□□□□□ -0.49
PKP4-213ENST00000486254 ASAH2Q9NR71 780 aa12□□□□□ -0.49
PKP4-213ENST00000486254 FBXO6Q9NRD1 293 aaPredicted RBP12□□□□□ -0.49
PKP4-213ENST00000486254 IGSF5Q9NSI5 407 aa12□□□□□ -0.49
PKP4-213ENST00000486254 XPR1Q9UBH6 696 aa12□□□□□ -0.49
PKP4-213ENST00000486254 VTI1BQ9UEU0 232 aa12□□□□□ -0.49
PKP4-213ENST00000486254 VPS51Q9UID3 782 aa12□□□□□ -0.49
PKP4-213ENST00000486254 RAI2Q9Y5P3 530 aa12□□□□□ -0.49
PKP4-213ENST00000486254 COMMD10Q9Y6G5 202 aa12□□□□□ -0.49
PKP4-213ENST00000486254 NUMBLQ9Y6R0 609 aa12□□□□□ -0.49
PKP4-213ENST00000486254 GBF1Q92538 1859 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 ZNF106Q9H2Y7 1883 aaKnown RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 ANKRD66B4E2M5 251 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 HSPA4LO95757 839 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 GOT2P00505 430 aaKnown RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 CKMP06732 381 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 ACRP10323 421 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 HSPA8P11142 646 aaKnown RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 LPOP22079 712 aaPredicted RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 GLDCP23378 1020 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 ADSLP30566 484 aaPredicted RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 HNRNPH1P31943 449 aaKnown RBP11.99□□□□□ -0.49
PKP4-213ENST00000486254 ARRB2P32121 409 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 PFKPQ01813 784 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 FPGSQ05932 587 aa11.99□□□□□ -0.49
PKP4-213ENST00000486254 SMAD1Q15797 465 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms