RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 FAM182AQ5T1J6 154 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 GPR155Q7Z3F1 870 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 BBS5Q8N3I7 341 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 CCNYQ8ND76 341 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 TRIM58Q8NG06 486 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 ARRDC2Q8TBH0 407 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 NSMCE1Q8WV22 266 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 P3H4Q92791 437 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 ZNF641Q96N77 438 aaPredicted RBP13.02□□□□□ -0.33
SSR4-211ENST00000486204 SUV39H2Q9H5I1 410 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 GAREM1Q9H706 876 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 NOD2Q9HC29 1040 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 PREBQ9HCU5 417 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 DYRK4Q9NR20 520 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 GGT7Q9UJ14 662 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 ATP8A1Q9Y2Q0 1164 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 FADS3Q9Y5Q0 445 aa13.02□□□□□ -0.33
SSR4-211ENST00000486204 A0A1B0GTW7 788 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 FAM47DPA6NHR8 397 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 AREL1O15033 823 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 HTRA2O43464 458 aaPredicted RBP13.01□□□□□ -0.33
SSR4-211ENST00000486204 AP1G1O43747 822 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 FSBPO95073 299 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 CER1O95813 267 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 TIMP2P16035 220 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 SERPINA4P29622 427 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 CCR5P51681 352 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
SSR4-211ENST00000486204 DSC2Q02487 901 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 AP1B1Q10567 949 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 TRAF2Q12933 501 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 SMAD1Q15797 465 aaKnown RBP13.01□□□□□ -0.33
SSR4-211ENST00000486204 TMEM259Q4ZIN3 620 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 RALGPS1Q5JS13 557 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 LRRC73Q5JTD7 316 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 FBXL19Q6PCT2 694 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 PCSK4Q6UW60 755 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 DBX2Q6ZNG2 339 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 TRIM69Q86WT6 500 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 ACTL9Q8TC94 416 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 HCAR2Q8TDS4 363 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 UBE2Q2Q8WVN8 375 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 QKIQ96PU8 341 aaKnown RBP eCLIP13.01□□□□□ -0.33
SSR4-211ENST00000486204 ALS2CR12Q96Q35 445 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 SEMA3CQ99985 751 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 TLR10Q9BXR5 811 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 CEP41Q9BYV8 373 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 POLR1EQ9GZS1 481 aaKnown RBP13.01□□□□□ -0.33
SSR4-211ENST00000486204 BRD8Q9H0E9 1235 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 ATP13A3Q9H7F0 1226 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 RBM22Q9NW64 420 aaKnown RBP eCLIP13.01□□□□□ -0.33
SSR4-211ENST00000486204 EIF2B4Q9UI10 523 aaKnown RBP13.01□□□□□ -0.33
SSR4-211ENST00000486204 PYCARDQ9ULZ3 195 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 ZFR2Q9UPR6 939 aaKnown RBP13.01□□□□□ -0.33
SSR4-211ENST00000486204 ITM2BQ9Y287 266 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 CABIN1Q9Y6J0 2220 aa13.01□□□□□ -0.33
SSR4-211ENST00000486204 ZNF462Q96JM2 2506 aa13□□□□□ -0.33
SSR4-211ENST00000486204 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3DA0A087WVF3 549 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3IA0A087WXS9 549 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3EA0A087X179 549 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3KA0A087X1G2 549 aa13□□□□□ -0.33
SSR4-211ENST00000486204 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13□□□□□ -0.33
SSR4-211ENST00000486204 A0A1W2PPC4 97 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TCRBV7S2A1N4TA0A589 114 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3FA6NER0 549 aaPredicted RBP13□□□□□ -0.33
SSR4-211ENST00000486204 USP27XA6NNY8 438 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3LB9A6J9 549 aa13□□□□□ -0.33
SSR4-211ENST00000486204 PYCARD-AS1I3L0S3 204 aa13□□□□□ -0.33
SSR4-211ENST00000486204 FLRT2O43155 660 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TLX3O43711 291 aaPredicted RBP13□□□□□ -0.33
SSR4-211ENST00000486204 RNGTTO60942 597 aaKnown RBP13□□□□□ -0.33
SSR4-211ENST00000486204 SOCS5O75159 536 aa13□□□□□ -0.33
SSR4-211ENST00000486204 JCHAINP01591 159 aa13□□□□□ -0.33
SSR4-211ENST00000486204 MMP2P08253 660 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3HP0C7X1 549 aa13□□□□□ -0.33
SSR4-211ENST00000486204 ITIH2P19823 946 aa13□□□□□ -0.33
SSR4-211ENST00000486204 BCL2L1Q07817 233 aa13□□□□□ -0.33
SSR4-211ENST00000486204 NIPAL4Q0D2K0 466 aa13□□□□□ -0.33
SSR4-211ENST00000486204 WASHC5Q12768 1159 aa13□□□□□ -0.33
SSR4-211ENST00000486204 XRCC4Q13426 336 aa13□□□□□ -0.33
SSR4-211ENST00000486204 CCDC157Q569K6 752 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3GQ6DHY5 549 aa13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3CQ6IPX1 549 aa13□□□□□ -0.33
SSR4-211ENST00000486204 NEK5Q6P3R8 708 aa13□□□□□ -0.33
SSR4-211ENST00000486204 IL27RAQ6UWB1 636 aa13□□□□□ -0.33
SSR4-211ENST00000486204 BZW1Q7L1Q6 419 aaKnown RBP13□□□□□ -0.33
SSR4-211ENST00000486204 ZC3H18Q86VM9 953 aaKnown RBP13□□□□□ -0.33
SSR4-211ENST00000486204 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
SSR4-211ENST00000486204 ZCCHC9Q8N567 271 aaKnown RBP13□□□□□ -0.33
SSR4-211ENST00000486204 TFB1MQ8WVM0 346 aaKnown RBP13□□□□□ -0.33
SSR4-211ENST00000486204 RAB7BQ96AH8 199 aa13□□□□□ -0.33
SSR4-211ENST00000486204 CARD9Q9H257 536 aa13□□□□□ -0.33
SSR4-211ENST00000486204 PCDHGC4Q9Y5F7 938 aa13□□□□□ -0.33
SSR4-211ENST00000486204 PCDHGB2Q9Y5G2 931 aa13□□□□□ -0.33
SSR4-211ENST00000486204 A0A1W2PQU0 124 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 HACD1B0YJ81 288 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 WNT9AO14904 365 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms