RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SLC7A4O43246 635 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 AVILO75366 819 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 APBB3O95704 486 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 HNF1BP35680 557 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 NPY2RP49146 381 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 TPMTP51580 245 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 NEK3P51956 506 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 PLTPP55058 493 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 SARNPP82979 210 aaKnown RBP15.9■□□□□ 0.14
APOE-205ENST00000485628 CREB5Q02930 508 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 RALGDSQ12967 914 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 CALCOCO2Q13137 446 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 TMEM52BQ4KMG9 183 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 CCNI2Q6ZMN8 369 aaPredicted RBP15.9■□□□□ 0.14
APOE-205ENST00000485628 RELL1Q8IUW5 271 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 TTC30BQ8N4P2 665 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 SLC25A41Q8N5S1 370 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 LPCAT1Q8NF37 534 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 BRSK1Q8TDC3 778 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 PBXIP1Q96AQ6 731 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 RANBP9Q96S59 729 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 SRPK1Q96SB4 655 aaKnown RBP15.9■□□□□ 0.14
APOE-205ENST00000485628 PCDH12Q9NPG4 1184 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 SPO11Q9Y5K1 396 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 FADS3Q9Y5Q0 445 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 KMT2EQ8IZD2 1858 aa15.9■□□□□ 0.14
APOE-205ENST00000485628 NPIPB15A6NHN6 443 aaPredicted RBP15.89■□□□□ 0.13
APOE-205ENST00000485628 PLRG1O43660 514 aaKnown RBP15.89■□□□□ 0.13
APOE-205ENST00000485628 LDB2O43679 373 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 DNTTP04053 509 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 MYBL2P10244 700 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 GM2AP17900 193 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 LHCGRP22888 699 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 MMP12P39900 470 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 PTSQ03393 145 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 POM121L1PQ3SYA9 428 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 CERCAMQ5T4B2 595 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 CRTC1Q6UUV9 634 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 PPP1R21Q6ZMI0 780 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 DPPA4Q7L190 304 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 TMC3Q7Z5M5 1100 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 TTC7BQ86TV6 843 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 KBTBD6Q86V97 674 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 RAVER1Q8IY67 606 aaKnown RBP15.89■□□□□ 0.13
APOE-205ENST00000485628 HDDC3Q8N4P3 179 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 TSTD1Q8NFU3 115 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 MYRIPQ8NFW9 859 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 PDCD6IPQ8WUM4 868 aaKnown RBP15.89■□□□□ 0.13
APOE-205ENST00000485628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.89■□□□□ 0.13
APOE-205ENST00000485628 NELL1Q92832 810 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 HHIPQ96QV1 700 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 TXLNGYQ9BZA5 131 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 KDM4CQ9H3R0 1056 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 TRABDQ9H4I3 376 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 PLAC1Q9HBJ0 212 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 CD93Q9NPY3 652 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 FBXL12Q9NXK8 326 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.89■□□□□ 0.134e-24■□□□□ 9.2
APOE-205ENST00000485628 RIMKLBQ9ULI2 386 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 TEX264Q9Y6I9 313 aa15.89■□□□□ 0.13
APOE-205ENST00000485628 V9GYY5 206 aaPredicted RBP15.89■□□□□ 0.13
APOE-205ENST00000485628 A0A1W2PP55 124 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 H0Y858 1186 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 GOLGA8MH3BSY2 632 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 AURKAO14965 403 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 EIF3HO15372 352 aaKnown RBP eCLIP15.88■□□□□ 0.13
APOE-205ENST00000485628 GPR37L1O60883 481 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 ALDH1A2O94788 518 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 PRKCGP05129 697 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 ALPIP09923 528 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 TPH1P17752 444 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 LMAN1P49257 510 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 TERF1P54274 439 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 VSNL1P62760 191 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 MAP7D1Q3KQU3 841 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 HMGB4Q8WW32 186 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 RMDN1Q96DB5 314 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 LRRC39Q96DD0 335 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 KIFC1Q9BW19 673 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 PARD6BQ9BYG5 372 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 IL22Q9GZX6 179 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 MRM3Q9HC36 420 aaKnown RBP15.88■□□□□ 0.13
APOE-205ENST00000485628 PIH1D1Q9NWS0 290 aaKnown RBP15.88■□□□□ 0.13
APOE-205ENST00000485628 HACD3Q9P035 362 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 B4GALT6Q9UBX8 382 aa15.88■□□□□ 0.13
APOE-205ENST00000485628 ZNF318Q5VUA4 2279 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 DOCK9Q9BZ29 2069 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 ZNF106Q9H2Y7 1883 aaKnown RBP15.87■□□□□ 0.13
APOE-205ENST00000485628 SDR42E2A6NKP2 422 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 CTPS1P17812 591 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 AVPR2P30518 371 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 VIPR1P32241 457 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 HMGCLP35914 325 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 ADPRHP54922 357 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 ARL4CP56559 192 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 ACVR1Q04771 509 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 CCDC15Q0P6D6 951 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 AGERQ15109 404 aa15.87■□□□□ 0.13
APOE-205ENST00000485628 TAF1AQ15573 450 aaPredicted RBP15.87■□□□□ 0.13
APOE-205ENST00000485628 HIF1AQ16665 826 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms