RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 ATXN7L3BQ96GX2 97 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 LRRC61Q9BV99 259 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 SLC39A8Q9C0K1 460 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 TCEAL2Q9H3H9 227 aaPredicted RBP13.35□□□□□ -0.27
UBA3-210ENST00000485424 HAUS4Q9H6D7 363 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 LRRC19Q9H756 370 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 ZWILCHQ9H900 591 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 PCDH12Q9NPG4 1184 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 MBNL1Q9NR56 388 aaKnown RBP13.35□□□□□ -0.27
UBA3-210ENST00000485424 TAS2R14Q9NYV8 317 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 MYO1AQ9UBC5 1043 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 GULP1Q9UBP9 304 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 KLQ9UEF7 1012 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 CNOT8Q9UFF9 292 aaKnown RBP13.35□□□□□ -0.27
UBA3-210ENST00000485424 PNMA8BQ9ULN7 279 aaPredicted RBP13.35□□□□□ -0.27
UBA3-210ENST00000485424 ATP8A1Q9Y2Q0 1164 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 ENTPD2Q9Y5L3 495 aa13.35□□□□□ -0.27
UBA3-210ENST00000485424 FLNCQ14315 2725 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 SPTA1P02549 2419 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 ZNF106Q9H2Y7 1883 aaKnown RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 PMS2P1A4D2B8 440 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 LMO7DNF2Z398 122 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 CASC3O15234 703 aaKnown RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 TCEA3O75764 348 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 SERPINC1P01008 464 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 TNFP01375 233 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 FTLP02792 175 aaPredicted RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 ELFN1P0C7U0 828 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 TSHRP16473 764 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 ERCC2P18074 760 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 NFKBIAP25963 317 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 ARL4AP40617 200 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 LIG3P49916 1009 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 HK3P52790 923 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 PDX1P52945 283 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 SKOR1P84550 965 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 RFTN1Q14699 578 aaPredicted RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 NFATC4Q14934 902 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 TCEA2Q15560 299 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 PERM1Q5SV97 790 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 PLEKHA7Q6IQ23 1121 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 RFX8Q6ZV50 586 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 APTXQ7Z2E3 356 aaKnown RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 CAMK1DQ8IU85 385 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 NSMCE1Q8WV22 266 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 SNRNP27Q8WVK2 155 aaKnown RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 WBP1Q96G27 269 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 PRR11Q96HE9 360 aaPredicted RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 KCTD15Q96SI1 283 aaPredicted RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 BPIFA3Q9BQP9 254 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
UBA3-210ENST00000485424 APOOQ9BUR5 198 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 DPH1Q9BZG8 443 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 EDEM3Q9BZQ6 932 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 SEMA4CQ9C0C4 833 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 PDFQ9HBH1 243 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
UBA3-210ENST00000485424 SIRPGQ9P1W8 387 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 PADI4Q9UM07 663 aa13.34□□□□□ -0.27
UBA3-210ENST00000485424 TSPAN11A1L157 253 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 H3BRJ5 948 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 CACNB4O00305 520 aaPredicted RBP13.33□□□□□ -0.28
UBA3-210ENST00000485424 GCATO75600 419 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 MYBL1P10243 752 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 GZMAP12544 262 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 KELP23276 732 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 MIPP30301 263 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 CSNK1DP48730 415 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 SCNN1BP51168 640 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 SRP54P61011 504 aaKnown RBP13.33□□□□□ -0.28
UBA3-210ENST00000485424 IL10RBQ08334 325 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 MTM1Q13496 603 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 ZNF235Q14590 738 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 INPP5AQ14642 412 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 CA9Q16790 459 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 WSCD2Q2TBF2 565 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 TDRD12Q587J7 1177 aaKnown RBP13.33□□□□□ -0.28
UBA3-210ENST00000485424 PSTKQ8IV42 348 aaKnown RBP13.33□□□□□ -0.28
UBA3-210ENST00000485424 SLC35F3Q8IY50 421 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 SDR16C5Q8N3Y7 309 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 LZTR1Q8N653 840 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 TSEN2Q8NCE0 465 aaKnown RBP13.33□□□□□ -0.28
UBA3-210ENST00000485424 FNIP1Q8TF40 1166 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 TTC9Q92623 222 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 TSACCQ96A04 125 aaPredicted RBP13.33□□□□□ -0.28
UBA3-210ENST00000485424 CCDC97Q96F63 343 aaPredicted RBP13.33□□□□□ -0.28
UBA3-210ENST00000485424 WDR92Q96MX6 357 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 SLC46A1Q96NT5 459 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 CCDC3Q9BQI4 270 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 HSD3B7Q9H2F3 369 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 WDR70Q9NW82 654 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 MOSPD1Q9UJG1 213 aa13.33□□□□□ -0.28
UBA3-210ENST00000485424 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.32□□□□□ -0.28
UBA3-210ENST00000485424 TMEM191CA6NGB0 347 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 CAPN8A6NHC0 703 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 CDRT15L2A8MXV6 281 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 YY2O15391 372 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 PRKCGP05129 697 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms