RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	SRBD1	Q8N5C6	995 aa	Known RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	C8orf58	Q8NAV2	365 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	KCNG4	Q8TDN1	519 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	PIGK	Q92643	395 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	INTS12	Q96CB8	462 aa	Known RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	COQ8B	Q96D53	544 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	USP44	Q9H0E7	712 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ZDHHC7	Q9NXF8	308 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ASIC5	Q9NY37	505 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	GRHL1	Q9NZI5	618 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	KIAA1456	Q9P272	454 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ADD3	Q9UEY8	706 aa	Known RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ZNF215	Q9UL58	517 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	MTMR6	Q9Y217	621 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	PCDHGB5	Q9Y5G0	923 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ABCC5	O15440	1437 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	SCAPER	Q9BY12	1400 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	ATP7A	Q04656	1500 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	MAP3K1	Q13233	1512 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	EFCAB6	Q5THR3	1501 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	DISP1	Q96F81	1524 aa		4.1	□□□□□ -1.75
VPS8-223	ENST00000485024	KAT6B	Q8WYB5	2073 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	TCRBV5S1A1T	A0A578	114 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	AHCYL1	O43865	530 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CBX6	O95503	412 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	MLYCD	O95822	493 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	PCNA	P12004	261 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	PRF1	P14222	555 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	PTPN2	P17706	415 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	TFEB	P19484	476 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	YWHAQ	P27348	245 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	LMAN1	P49257	510 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	HSF1	Q00613	529 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	RHAG	Q02094	409 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CYP4A11	Q02928	519 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	TMEM115	Q12893	351 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	SLC14A1	Q13336	389 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	VEPH1	Q14D04	833 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	PSMD6	Q15008	389 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CCDC96	Q2M329	555 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	DUSP28	Q4G0W2	176 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	SERTAD4-AS1	Q5TG53	156 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	NAPEPLD	Q6IQ20	393 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CPLX2	Q6PUV4	134 aa	Known RBP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	LRIG3	Q6UXM1	1119 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CYB5R4	Q7L1T6	521 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	RTL10	Q7L3V2	364 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	PRPF39	Q86UA1	669 aa	Known RBP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	FAM160B2	Q86V87	743 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	TMC8	Q8IU68	726 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	ARHGAP12	Q8IWW6	846 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	ADHFE1	Q8IWW8	467 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	ADGRF2	Q8IZF7	708 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	FAM185A	Q8N0U4	392 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CNTROB	Q8N137	903 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	TMTC2	Q8N394	836 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	EXD3	Q8N9H8	876 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CADM4	Q8NFZ8	388 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	C16orf52	Q8NHV5	167 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	HDAC7	Q8WUI4	952 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	TMEM170A	Q8WVE7	144 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	SGCD	Q92629	289 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	OTULIN	Q96BN8	352 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	PGAM5	Q96HS1	289 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	THOC3	Q96J01	351 aa	Known RBP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CLMN	Q96JQ2	1002 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	ZNF347	Q96SE7	839 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	PIP5K1A	Q99755	562 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	STRA6	Q9BX79	667 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	TEX12	Q9BXU0	123 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	TTYH1	Q9H313	450 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024		Q9N2J8	555 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	PLSCR4	Q9NRQ2	329 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	ATP8A2	Q9NTI2	1148 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	MORF4L1	Q9UBU8	362 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	SLCO3A1	Q9UIG8	710 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	HAO1	Q9UJM8	370 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	A4GNT	Q9UNA3	340 aa		4.09	□□□□□ -1.75
VPS8-223	ENST00000485024	DPPA5	A6NC42	116 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	PABPN1L	A6NDY0	278 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	MROH2A	A6NES4	1674 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	C4orf47	A7E2U8	309 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	USP17L23	D6RBM5	183 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	TAF4	O00268	1085 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	UTY	O14607	1347 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	SCAMP1	O15126	338 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	ADGRB2	O60241	1585 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	IPO7	O95373	1038 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	NFATC1	O95644	943 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	WIZ	O95785	1651 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	ADA	P00813	363 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	RGPD1	P0DJD0	1748 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	SLC2A4	P14672	509 aa		4.08	□□□□□ -1.76
VPS8-223	ENST00000485024	TM4SF1	P30408	202 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms