RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 NRSN2Q9GZP1 204 aa16.79■□□□□ 0.28
PCGF3-211ENST00000484141 ATP13A3Q9H7F0 1226 aa16.79■□□□□ 0.28
PCGF3-211ENST00000484141 NOD2Q9HC29 1040 aa16.79■□□□□ 0.28
PCGF3-211ENST00000484141 DONSONQ9NYP3 566 aa16.79■□□□□ 0.28
PCGF3-211ENST00000484141 APOBEC3BQ9UH17 382 aaKnown RBP16.79■□□□□ 0.28
PCGF3-211ENST00000484141 PCDHB1Q9Y5F3 818 aa16.79■□□□□ 0.28
PCGF3-211ENST00000484141 RP1P56715 2156 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 TMEM110-MUSTN1A8MSY1 372 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 MYO1FO00160 1098 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 MFSD11O43934 449 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 LZTS3O60299 673 aaPredicted RBP16.78■□□□□ 0.28
PCGF3-211ENST00000484141 CR2P20023 1033 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 SERPINA4P29622 427 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 HNRNPH3P31942 346 aaKnown RBP16.78■□□□□ 0.28
PCGF3-211ENST00000484141 NSUN2Q08J23 767 aaKnown RBP eCLIP16.78■□□□□ 0.28
PCGF3-211ENST00000484141 TRAF2Q12933 501 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 DPYSL3Q14195 570 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 KRT81Q14533 505 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 CFAP58Q5T655 872 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 FAXCQ5TGI0 409 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 TMCO4Q5TGY1 634 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 GUSBP11Q6P575 273 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 BRAT1Q6PJG6 821 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 LIPIQ6XZB0 460 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 ZSCAN30Q86W11 494 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 LZTR1Q8N653 840 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 PCDH19Q8TAB3 1148 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 APOOQ9BUR5 198 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 CTTNBP2NLQ9P2B4 639 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 SEPT3Q9UH03 358 aa16.78■□□□□ 0.28
PCGF3-211ENST00000484141 CAPN8A6NHC0 703 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 CYSRT1A8MQ03 144 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 RECQL5O94762 991 aaPredicted RBP16.77■□□□□ 0.28
PCGF3-211ENST00000484141 MT-CO3P00414 261 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 TSHRP16473 764 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 CXADRP78310 365 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 ZNF235Q14590 738 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 RFTN1Q14699 578 aaPredicted RBP16.77■□□□□ 0.28
PCGF3-211ENST00000484141 GRM3Q14832 879 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 RTP5Q14D33 572 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 ALG11Q2TAA5 492 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 PERM1Q5SV97 790 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 NCBP2-AS2Q69YL0 99 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 ERAP2Q6P179 960 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 ENPP7Q6UWV6 458 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 MACC1Q6ZN28 852 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 RD3Q7Z3Z2 195 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.77■□□□□ 0.28
PCGF3-211ENST00000484141 FAM71BQ8TC56 605 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 IFI44Q8TCB0 444 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 PDCD6IPQ8WUM4 868 aaKnown RBP16.77■□□□□ 0.28
PCGF3-211ENST00000484141 FGF11Q92914 225 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 TSPY26PQ9H489 355 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 SPTLC3Q9NUV7 552 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 B4GALT6Q9UBX8 382 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 CLCA2Q9UQC9 943 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.77■□□□□ 0.28
PCGF3-211ENST00000484141 ZNF462Q96JM2 2506 aa16.77■□□□□ 0.28
PCGF3-211ENST00000484141 CPED1A4D0V7 1026 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 NEMP2A6NFY4 417 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 H3BM21 787 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 YY2O15391 372 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 OPA1O60313 960 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 PROSCO94903 275 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 ALPPL2P10696 532 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 TGM2P21980 687 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 ZNF135P52742 658 aaPredicted RBP16.76■□□□□ 0.27
PCGF3-211ENST00000484141 YPEL5P62699 121 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 CCDC173Q0VFZ6 552 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 ILKQ13418 452 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 PTK2BQ14289 1009 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 SLC18A3Q16572 532 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 HS1BP3Q53T59 392 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 TAF1BQ53T94 588 aaPredicted RBP16.76■□□□□ 0.27
PCGF3-211ENST00000484141 SPECC1LQ69YQ0 1117 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 PCSK4Q6UW60 755 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 RFLNAQ6ZTI6 216 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 DPPA4Q7L190 304 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 HID1Q8IV36 788 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 VSTM4Q8IW00 320 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 SFTPA2Q8IWL1 248 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 SLC35F3Q8IY50 421 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 ATPAF2Q8N5M1 289 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 PAF1Q8N7H5 531 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 FAM181AQ8N9Y4 354 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 RFFLQ8WZ73 363 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 ZNF599Q96NL3 588 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 NUDCD1Q96RS6 583 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 DNAJC7Q99615 494 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 MGME1Q9BQP7 344 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 LGR4Q9BXB1 951 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 C1QTNF7Q9BXJ2 289 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 NT5MQ9NPB1 228 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 MRPL40Q9NQ50 206 aaKnown RBP16.76■□□□□ 0.27
PCGF3-211ENST00000484141 CSNK1G3Q9Y6M4 447 aa16.76■□□□□ 0.27
PCGF3-211ENST00000484141 TMEM202A6NGA9 273 aa16.75■□□□□ 0.27
PCGF3-211ENST00000484141 HTRA2O43464 458 aaPredicted RBP16.75■□□□□ 0.27
PCGF3-211ENST00000484141 BRINP1O60477 761 aa16.75■□□□□ 0.27
PCGF3-211ENST00000484141 PDHA1P08559 390 aa16.75■□□□□ 0.27
PCGF3-211ENST00000484141 ELFN1P0C7U0 828 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms