RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SOCS5O75159 536 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 PGLSO95336 258 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 TOP3BO95985 862 aaKnown RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 PROCP04070 461 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 BPGMP07738 259 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 PIRTP0C851 137 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 COL6A2P12110 1019 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 SLC8A1P32418 973 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 CTSOP43234 321 aaPredicted RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 ABCG1P45844 678 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 VASPP50552 380 aaPredicted RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 PRAMEP78395 509 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 SULT2A1Q06520 285 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 ITIH4Q14624 930 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 PTPRCAPQ14761 206 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 ZKSCAN8Q15776 578 aaPredicted RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 GLIPR1L2Q4G1C9 344 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 N4BP2L1Q5TBK1 243 aaPredicted RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 MICALCLQ6ZW33 695 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 GPR149Q86SP6 731 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 ADIPOR2Q86V24 386 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 TRIM42Q8IWZ5 723 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 PLPP6Q8IY26 295 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 PLD6Q8N2A8 252 aaKnown RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 CCDC197Q8NCU1 140 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 OR13C4Q8NGS5 318 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 RAB3IL1Q8TBN0 382 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 MRPL38Q96DV4 380 aaKnown RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 ATXN7L3BQ96GX2 97 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 C19orf43Q9BQ61 176 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 C1QTNF1Q9BXJ1 281 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 CEP44Q9C0F1 390 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 CAB39LQ9H9S4 337 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 MAGEE1Q9HCI5 957 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 TMEM216Q9P0N5 145 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 EVLQ9UI08 416 aaPredicted RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 SLC39A10Q9ULF5 831 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 PHTF1Q9UMS5 762 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 FAM95CA0A1B0GW59 222 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 C2orf81A6NN90 581 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 IGSF6O95976 241 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 GOT2P00505 430 aaKnown RBP14.09□□□□□ -0.15
CLK3-204ENST00000483723 OGNP20774 298 aaKnown RBP14.09□□□□□ -0.15
CLK3-204ENST00000483723 LPOP22079 712 aaPredicted RBP14.09□□□□□ -0.15
CLK3-204ENST00000483723 CLCN5P51795 746 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 POU4F1Q01851 419 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 USP10Q14694 798 aaKnown RBP14.09□□□□□ -0.15
CLK3-204ENST00000483723 DHCR24Q15392 516 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 DLG2Q15700 870 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 ZNF789Q5FWF6 425 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 ARMC12Q5T9G4 340 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 C16orf46Q6P387 395 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 CNSTQ6PJW8 725 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 PTAR1Q7Z6K3 402 aaPredicted RBP14.09□□□□□ -0.15
CLK3-204ENST00000483723 NPAS3Q8IXF0 933 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 OR2AP1Q8NGE2 309 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 OR6P1Q8NGX9 317 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 OSCP1Q8WVF1 389 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 SMIM14Q96QK8 99 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 TM6SF2Q9BZW4 377 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 SLC28A3Q9HAS3 691 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 TRPV4Q9HBA0 871 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 SLCO1B3Q9NPD5 702 aa14.09□□□□□ -0.15
CLK3-204ENST00000483723 MARCH4Q9P2E8 410 aaPredicted RBP14.09□□□□□ -0.15
CLK3-204ENST00000483723 USP15Q9Y4E8 981 aaPredicted RBP14.09□□□□□ -0.15
CLK3-204ENST00000483723 H7C0S8 307 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 CCL22O00626 93 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 CD3EAPO15446 510 aaKnown RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 BUD23O43709 281 aaKnown RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 GLP2RO95838 553 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 CISD3P0C7P0 127 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 BGNP21810 368 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 FSHRP23945 695 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 CRABP2P29373 138 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 GRIA4P48058 902 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 SNRPD1P62314 119 aaKnown RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 EML3Q32P44 896 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 CCDC153Q494R4 210 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 OTOAQ7RTW8 1153 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 GLT6D1Q7Z4J2 308 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 CAMK1DQ8IU85 385 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 NUDCD3Q8IVD9 361 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 PCDH20Q8N6Y1 951 aaKnown RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 OR4K2Q8NGD2 314 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 OR4L1Q8NH43 312 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 RPL10LQ96L21 214 aaKnown RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 ASB16Q96NS5 453 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 TUBGCP5Q96RT8 1024 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 CPEB1Q9BZB8 566 aaKnown RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 SUDS3Q9H7L9 328 aaPredicted RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 FBXO6Q9NRD1 293 aaPredicted RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 DUS2Q9NX74 493 aaKnown RBP14.08□□□□□ -0.16
CLK3-204ENST00000483723 OBP2AQ9NY56 170 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 PCDHB9Q9Y5E1 797 aa14.08□□□□□ -0.16
CLK3-204ENST00000483723 OR51F1A6NGY5 319 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 HOXC11O43248 304 aaPredicted RBP14.07□□□□□ -0.16
CLK3-204ENST00000483723 CYP17A1P05093 508 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SLC35E2BP0CK96 405 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 GMPRP36959 345 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 ABL2P42684 1182 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms