RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ARHGEF7Q14155 803 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 DPYSL3Q14195 570 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 NFATC4Q14934 902 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 AGERQ15109 404 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 NR0B2Q15466 257 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 IFI16Q16666 785 aaKnown RBP19.99■□□□□ 0.79
MSH5-215ENST00000482280 ANKRD20A8PQ5CZ79 823 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 KDM7AQ6ZMT4 941 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 ZSWIM9Q86XI8 627 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 RHOT2Q8IXI1 618 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 RBFAQ8N0V3 343 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 PACSIN1Q9BY11 444 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 POLR1EQ9GZS1 481 aaKnown RBP19.99■□□□□ 0.79
MSH5-215ENST00000482280 NHEJ1Q9H9Q4 299 aaPredicted RBP19.99■□□□□ 0.79
MSH5-215ENST00000482280 NOD2Q9HC29 1040 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 NT5MQ9NPB1 228 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 PHTF1Q9UMS5 762 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 OR1A2Q9Y585 309 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 DOCK9Q9BZ29 2069 aa19.99■□□□□ 0.79
MSH5-215ENST00000482280 CACNA1BQ00975 2339 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 CPED1A4D0V7 1026 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 AKR1B15C9JRZ8 316 aaPredicted RBP19.98■□□□□ 0.79
MSH5-215ENST00000482280 PDE2AO00408 941 aaPredicted RBP19.98■□□□□ 0.79
MSH5-215ENST00000482280 TRAFD1O14545 582 aaPredicted RBP19.98■□□□□ 0.79
MSH5-215ENST00000482280 CD48P09326 243 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 CES1P23141 567 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 GARSP41250 739 aaKnown RBP19.98■□□□□ 0.79
MSH5-215ENST00000482280 MAXP61244 160 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 INSM1Q01101 510 aaPredicted RBP19.98■□□□□ 0.79
MSH5-215ENST00000482280 C1orf61Q13536 156 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 TPRG1LQ5T0D9 272 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 ARMC12Q5T9G4 340 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 LIPIQ6XZB0 460 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 USP45Q70EL2 814 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 IFI44Q8TCB0 444 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 MAPK15Q8TD08 544 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 WDR92Q96MX6 357 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 MAK16Q9BXY0 300 aaKnown RBP19.98■□□□□ 0.79
MSH5-215ENST00000482280 TRIM5Q9C035 493 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 DKK4Q9UBT3 224 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 KLF15Q9UIH9 416 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 NENFQ9UMX5 172 aa19.98■□□□□ 0.79
MSH5-215ENST00000482280 TTC24A2A3L6 582 aaPredicted RBP19.97■□□□□ 0.79
MSH5-215ENST00000482280 LMO7DNF2Z398 122 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 MFSD11O43934 449 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 MT-CO3P00414 261 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 TNFP01375 233 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 VIPR1P32241 457 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 ARHGAP25P42331 645 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 HK3P52790 923 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 EPHB1P54762 984 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 CLDN6P56747 220 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 SRP54P61011 504 aaKnown RBP19.97■□□□□ 0.79
MSH5-215ENST00000482280 GALNT2Q10471 571 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 PAFAH1B3Q15102 231 aaKnown RBP19.97■□□□□ 0.79
MSH5-215ENST00000482280 CDKN3Q16667 212 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 DENND2CQ68D51 928 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 NCBP2-AS2Q69YL0 99 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 GKN2Q86XP6 184 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 CACTIN-AS1Q8N1I8 211 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 SDR16C5Q8N3Y7 309 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 CCNYQ8ND76 341 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 SLC35G2Q8TBE7 412 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 FAM71BQ8TC56 605 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 RFFLQ8WZ73 363 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 NAT6Q93015 286 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 DEPDC7Q96QD5 511 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 LRRC61Q9BV99 259 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 WDR26Q9H7D7 661 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 SPTLC3Q9NUV7 552 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 B4GALT6Q9UBX8 382 aa19.97■□□□□ 0.79
MSH5-215ENST00000482280 LRRD1A4D1F6 860 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 GOLGA6CA6NDK9 693 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 GOLGA6BA6NDN3 693 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 HTRA2O43464 458 aaPredicted RBP19.96■□□□□ 0.79
MSH5-215ENST00000482280 OPA1O60313 960 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 PEX11BO96011 259 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 GOLGA6DP0CG33 693 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 GIMD1P0DJR0 217 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 TSHRP16473 764 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 IL4RP24394 825 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 CCNCP24863 283 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 RALGDSQ12967 914 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 CAMK2BQ13554 666 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 ASTE1Q2TB18 679 aaPredicted RBP19.96■□□□□ 0.79
MSH5-215ENST00000482280 ATP13A4Q4VNC1 1196 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 EFL1Q7Z2Z2 1120 aaKnown RBP19.96■□□□□ 0.79
MSH5-215ENST00000482280 PGBD5Q8N414 524 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 TPCN2Q8NHX9 752 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 PCDH19Q8TAB3 1148 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 TSACCQ96A04 125 aaPredicted RBP19.96■□□□□ 0.79
MSH5-215ENST00000482280 NUS1Q96E22 293 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 SEMA3CQ99985 751 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 NRSN2Q9GZP1 204 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 GOLGA6AQ9NYA3 693 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 AMACRQ9UHK6 382 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 MOSPD1Q9UJG1 213 aa19.96■□□□□ 0.79
MSH5-215ENST00000482280 PTPRBP23467 1997 aa19.95■□□□□ 0.78
MSH5-215ENST00000482280 MATN3O15232 486 aa19.95■□□□□ 0.78
MSH5-215ENST00000482280 MYF5P13349 255 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms