RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 KLHL22Q53GT1 634 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 C9orf57Q5W0N0 161 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 CAPRIN2Q6IMN6 1127 aaKnown RBP5.27□□□□□ -1.57
CALD1-219ENST00000480638 INO80CQ6PI98 192 aaPredicted RBP5.27□□□□□ -1.57
CALD1-219ENST00000480638 DLK2Q6UY11 383 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 C16orf82Q7Z2V1 217 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 SLC46A3Q7Z3Q1 461 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 AGBL3Q8NEM8 1001 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 CADM4Q8NFZ8 388 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 RTP4Q96DX8 246 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 NR1H4Q96RI1 486 aaPredicted RBP5.27□□□□□ -1.57
CALD1-219ENST00000480638 SEC62Q99442 399 aaKnown RBP5.27□□□□□ -1.57
CALD1-219ENST00000480638 JMJD4Q9H9V9 463 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 PREBQ9HCU5 417 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 BPIFA1Q9NP55 256 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 CDC14AQ9UNH5 594 aa5.27□□□□□ -1.57
CALD1-219ENST00000480638 LSM4Q9Y4Z0 139 aaKnown RBP5.27□□□□□ -1.57
CALD1-219ENST00000480638 KDM3AQ9Y4C1 1321 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 hDV102S1A0JD36 115 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 CPED1A4D0V7 1026 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 ZIC3O60481 467 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 IGHV4-30-4P0DP06 118 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 ATP1A3P13637 1013 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 SSTR2P30874 369 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 HNRNPH1P31943 449 aaKnown RBP5.26□□□□□ -1.57
CALD1-219ENST00000480638 SHMT1P34896 483 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 FOXD4Q12950 439 aaPredicted RBP5.26□□□□□ -1.57
CALD1-219ENST00000480638 NEDD9Q14511 834 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 IZUMO4Q1ZYL8 232 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 SETMARQ53H47 684 aaPredicted RBP5.26□□□□□ -1.57
CALD1-219ENST00000480638 PPP6R3Q5H9R7 873 aaPredicted RBP5.26□□□□□ -1.57
CALD1-219ENST00000480638 ANKRD54Q6NXT1 300 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 FBXO46Q6PJ61 603 aaPredicted RBP5.26□□□□□ -1.57
CALD1-219ENST00000480638 PRSS57Q6UWY2 283 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.26□□□□□ -1.57
CALD1-219ENST00000480638 MTSS1LQ765P7 747 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 LINGO2Q7L985 606 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 ARMC9Q7Z3E5 817 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 ZC3HC1Q86WB0 502 aaKnown RBP5.26□□□□□ -1.57
CALD1-219ENST00000480638 PGBD5Q8N414 524 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 ZBTB2Q8N680 514 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 ZNF114Q8NC26 417 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 NAXEQ8NCW5 288 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 PABPC5Q96DU9 382 aaKnown RBP5.26□□□□□ -1.57
CALD1-219ENST00000480638 SAAL1Q96ER3 474 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 ZNF570Q96NI8 536 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 TKTL2Q9H0I9 626 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 BRF2Q9HAW0 419 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 WWOXQ9NZC7 414 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 SLC9A2Q9UBY0 812 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 TMEM98Q9Y2Y6 226 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 PCDHGB1Q9Y5G3 927 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 STON1Q9Y6Q2 735 aa5.26□□□□□ -1.57
CALD1-219ENST00000480638 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 GAGE7O76087 117 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 HOXB5P09067 269 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 GAGE12FP0CL80 117 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 GAGE12GP0CL81 117 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 GAGE12IP0CL82 117 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 CPOXP36551 454 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 HARS2P49590 506 aaKnown RBP5.25□□□□□ -1.57
CALD1-219ENST00000480638 CTCFP49711 727 aaPredicted RBP5.25□□□□□ -1.57
CALD1-219ENST00000480638 GNAQP50148 359 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 GAGE1Q13065 139 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 GAGE4Q13068 117 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 B3GNT6Q6ZMB0 384 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 HUS1BQ8NHY5 278 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 LMO3Q8TAP4 145 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 ADGRG7Q96K78 797 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 USP44Q9H0E7 712 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 ESRP2Q9H6T0 727 aaKnown RBP5.25□□□□□ -1.57
CALD1-219ENST00000480638 NOX4Q9NPH5 578 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 MKKSQ9NPJ1 570 aaPredicted RBP5.25□□□□□ -1.57
CALD1-219ENST00000480638 SLCO3A1Q9UIG8 710 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 PROCRQ9UNN8 238 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 NFS1Q9Y697 457 aa5.25□□□□□ -1.57
CALD1-219ENST00000480638 TTC36A6NLP5 189 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 BTBD18B2RXH4 712 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 SNAP23O00161 211 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 SEC14L5O43304 696 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 NDUFS7O75251 213 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 SEC31AO94979 1220 aaKnown RBP5.24□□□□□ -1.57
CALD1-219ENST00000480638 PEX5P50542 639 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 EIF3BP55884 814 aaKnown RBP5.24□□□□□ -1.57
CALD1-219ENST00000480638 HIST2H2BCQ6DN03 193 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 HIST2H2BDQ6DRA6 164 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 RHBDF2Q6PJF5 856 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 QSOX2Q6ZRP7 698 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 LILRB1Q8NHL6 650 aaPredicted RBP5.24□□□□□ -1.57
CALD1-219ENST00000480638 SCMH1Q96GD3 660 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 PPM1MQ96MI6 270 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 SLITRK1Q96PX8 696 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 GAREM1Q9H706 876 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 TAS2R10Q9NYW0 307 aa5.24□□□□□ -1.57
CALD1-219ENST00000480638 PLSCR5A0PG75 271 aa5.23□□□□□ -1.57
CALD1-219ENST00000480638 TMEM202A6NGA9 273 aa5.23□□□□□ -1.57
CALD1-219ENST00000480638 LRRC53A6NM62 1247 aa5.23□□□□□ -1.57
CALD1-219ENST00000480638 USP17L23D6RBM5 183 aa5.23□□□□□ -1.57
CALD1-219ENST00000480638 CYC1P08574 325 aa5.23□□□□□ -1.57
CALD1-219ENST00000480638 DAOP14920 347 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms