RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	TEDDM1	Q5T9Z0	273 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	EXOC3L1	Q86VI1	746 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	RASSF3	Q86WH2	238 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	PLCD3	Q8N3E9	789 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	OR13C4	Q8NGS5	318 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	UCMA	Q8WVF2	138 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	TUBGCP5	Q96RT8	1024 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	AGAP2	Q99490	1192 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	IARS2	Q9NSE4	1012 aa	Known RBP	11.27	□□□□□ -0.61
APTX-223	ENST00000479656	ZFAT	Q9P243	1243 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	HCN2	Q9UL51	889 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	COL4A3	Q01955	1670 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	CCL22	O00626	93 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	PAPSS2	O95340	614 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-223	ENST00000479656	CRTAM	O95727	393 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	UGT2B4	P06133	528 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	ASGR2	P07307	311 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	F7	P08709	466 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-223	ENST00000479656	KRT15	P19012	456 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	PAM	P19021	973 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	ARNT	P27540	789 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	GRIA4	P48058	902 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	PPARD	Q03181	441 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	PREPL	Q4J6C6	727 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-223	ENST00000479656	ARMC3	Q5W041	872 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	PDPK2P	Q6A1A2	396 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	GDPD4	Q6W3E5	623 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	MARK2	Q7KZI7	788 aa	Known RBP	11.26	□□□□□ -0.61
APTX-223	ENST00000479656	GLT6D1	Q7Z4J2	308 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	OR13J1	Q8NGT2	312 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	GRIN3A	Q8TCU5	1115 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	HDAC10	Q969S8	669 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	TBATA	Q96M53	351 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	ZNF641	Q96N77	438 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-223	ENST00000479656	KLHL32	Q96NJ5	620 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	PSAT1	Q9Y617	370 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	WASF2	Q9Y6W5	498 aa		11.26	□□□□□ -0.61
APTX-223	ENST00000479656	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.26	□□□□□ -0.61
APTX-223	ENST00000479656		A0A1W2PPM1	405 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	C2orf81	A6NN90	581 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656		A8MX80	341 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	LEFTY1	O75610	366 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	SLC4A1	P02730	911 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	CTSL	P07711	333 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	CREB1	P16220	341 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	ATP5D	P30049	168 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	HPD	P32754	393 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	HNF1B	P35680	557 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	ARSD	P51689	593 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	RPL26	P61254	145 aa	Known RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	LAMB3	Q13751	1172 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	GRM3	Q14832	879 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	TAF1A	Q15573	450 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	GPR153	Q6NV75	609 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	ZNF449	Q6P9G9	518 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	NUDT18	Q6ZVK8	323 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	NLRP9	Q7RTR0	991 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	KDM1B	Q8NB78	822 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	STYX	Q8WUJ0	223 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	ECHDC3	Q96DC8	303 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	DNAJC1	Q96KC8	554 aa	Known RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	ACOX2	Q99424	681 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	P2RY13	Q9BPV8	354 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	STMN4	Q9H169	189 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	TMEM245	Q9H330	911 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	MAGEE1	Q9HCI5	957 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	IL36A	Q9UHA7	158 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	ZNF180	Q9UJW8	692 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	RPL26L1	Q9UNX3	145 aa	Known RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	UNC80	Q8N2C7	3258 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656		A0A0J9YYE9	177 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	IQANK1	A0A1B0GTG1	560 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	SPECC1L-ADORA2A	F8WAN1	911 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	SIN3B	O75182	1162 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	TRBC1	P01850	177 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	LPO	P22079	712 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	IL12RB1	P42701	662 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	CBX1	P83916	185 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	SEMG2	Q02383	582 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	THOC5	Q13769	683 aa	Known RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	SMAD2	Q15796	467 aa	Known RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	C9orf64	Q5T6V5	341 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	EGFLAM	Q63HQ2	1017 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	TXNDC11	Q6PKC3	985 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	SERPINA13P	Q6UXR4	307 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	PACS1	Q6VY07	963 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	STRA8	Q7Z7C7	330 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	SRRM1	Q8IYB3	904 aa	Known RBP	11.25	□□□□□ -0.61
APTX-223	ENST00000479656	STK40	Q8N2I9	435 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	OR4K2	Q8NGD2	314 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	OR6P1	Q8NGX9	317 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	ERLEC1	Q96DZ1	483 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	CDKN2AIPNL	Q96HQ2	116 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	GPR63	Q9BZJ6	419 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	BPIFA1	Q9NP55	256 aa		11.25	□□□□□ -0.61
APTX-223	ENST00000479656	HEBP1	Q9NRV9	189 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms