RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 A6NNZ2 444 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 FPGTO14772 594 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 FTCDO95954 541 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 CPP00450 1065 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 CYP2A6P11509 494 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-217ENST00000479161 RABIFP47224 123 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 PFN3P60673 137 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 ITKQ08881 620 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 NIPAL4Q0D2K0 466 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 RALGDSQ12967 914 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 KLF1Q13351 362 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-217ENST00000479161 SUZ12Q15022 739 aaKnown RBP15.55■□□□□ 0.08
C9orf3-217ENST00000479161 MEI1Q5TIA1 1274 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 LIPIQ6XZB0 460 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 USP45Q70EL2 814 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 ERMP1Q7Z2K6 904 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 PIP4P1Q86T03 277 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 NLRP8Q86W28 1048 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 HAUS1Q96CS2 278 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 BMFQ96LC9 184 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 ELF4Q99607 663 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-217ENST00000479161 GTPBP2Q9BX10 602 aaKnown RBP15.55■□□□□ 0.08
C9orf3-217ENST00000479161 FRMD8P1Q9BZ68 369 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-217ENST00000479161 CARD9Q9H257 536 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 SAE1Q9UBE0 346 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-217ENST00000479161 GGT7Q9UJ14 662 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 ITM2BQ9Y287 266 aa15.55■□□□□ 0.08
C9orf3-217ENST00000479161 A0A1B0GTQ1 180 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 MMP20O60882 483 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 PRLP01236 227 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 EPOP01588 193 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 MMP2P08253 660 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 CEACAM1P13688 526 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 CD59P13987 128 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 PRLRP16471 622 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 ZNF30P17039 623 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 PTPN3P26045 913 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 ARRB1P49407 418 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-217ENST00000479161 LIG3P49916 1009 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 SKOR1P84550 965 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 DSC2Q02487 901 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 WASHC5Q12768 1159 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 IHHQ14623 411 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 GCNT7Q6ZNI0 430 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 ACTL9Q8TC94 416 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 HTR3CQ8WXA8 447 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 SRPK1Q96SB4 655 aaKnown RBP15.54■□□□□ 0.08
C9orf3-217ENST00000479161 HEMGNQ9BXL5 484 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 ADGRE3Q9BY15 652 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 GLOD4Q9HC38 313 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 TM7SF3Q9NS93 570 aa15.54■□□□□ 0.08
C9orf3-217ENST00000479161 A0A0J9YYE9 177 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 ANKRD66B4E2M5 251 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 TRBC1P01850 177 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 HOXC4P09017 264 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-217ENST00000479161 THEGLP0DJG4 465 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 C6P13671 934 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 TEAD1P28347 426 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 VIPR1P32241 457 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 CCT8P50990 548 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 FAM193AP78312 1265 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 OTUD4Q01804 1114 aaKnown RBP15.53■□□□□ 0.08
C9orf3-217ENST00000479161 LRRC14Q15048 493 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 RPS6KA1Q15418 735 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 CCDC181Q5TID7 509 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 SPATS2Q86XZ4 545 aaKnown RBP15.53■□□□□ 0.08
C9orf3-217ENST00000479161 TP53I13Q8NBR0 393 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-217ENST00000479161 PPP1R2P1Q96PQ5 205 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 FCRL5Q96RD9 977 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 HERPUD2Q9BSE4 406 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 PCDH9Q9HC56 1237 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 LZTFL1Q9NQ48 299 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 SPTBN2O15020 2390 aa15.53■□□□□ 0.08
C9orf3-217ENST00000479161 SPTY2D1-AS1A0A0U1RR47 76 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 TTC24A2A3L6 582 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-217ENST00000479161 POM121BA6NF01 834 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 RAD51BO15315 384 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 FLRT2O43155 660 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 ZSCAN12O43309 604 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 HEXIM1O94992 359 aaKnown RBP15.52■□□□□ 0.08
C9orf3-217ENST00000479161 PDHA1P08559 390 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 ELFN1P0C7U0 828 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 RBP3P10745 1247 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 ITIH2P19823 946 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 TRIM23P36406 574 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 MTM1Q13496 603 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 PTK2BQ14289 1009 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 GSE1Q14687 1217 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 Q6ZSR6 202 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 ZC3H18Q86VM9 953 aaKnown RBP15.52■□□□□ 0.08
C9orf3-217ENST00000479161 CDKL3Q8IVW4 592 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-217ENST00000479161 PAF1Q8N7H5 531 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 PDCD6IPQ8WUM4 868 aaKnown RBP15.52■□□□□ 0.08
C9orf3-217ENST00000479161 KLK6Q92876 244 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 TBATAQ96M53 351 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 COQ10AQ96MF6 247 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 AGAP3Q96P47 875 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 TRIB3Q96RU7 358 aa15.52■□□□□ 0.08
C9orf3-217ENST00000479161 WRAP53Q9BUR4 548 aaKnown RBP15.52■□□□□ 0.08
C9orf3-217ENST00000479161 SLC32A1Q9H598 525 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms