RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ACVR1CQ8NER5 493 aa21.33■■□□□ 1
SDF4-206ENST00000478938 OR5H6Q8NGV6 325 aa21.33■■□□□ 1
SDF4-206ENST00000478938 PHF10Q8WUB8 498 aaKnown RBP21.33■■□□□ 1
SDF4-206ENST00000478938 FTHL17Q9BXU8 183 aa21.33■■□□□ 1
SDF4-206ENST00000478938 TRIM8Q9BZR9 551 aa21.33■■□□□ 1
SDF4-206ENST00000478938 CYTH4Q9UIA0 394 aa21.33■■□□□ 1
SDF4-206ENST00000478938 V9GYQ6 96 aa21.33■■□□□ 1
SDF4-206ENST00000478938 A0A0X1KG70 313 aa21.32■■□□□ 1
SDF4-206ENST00000478938 AQP12BA6NM10 295 aa21.32■■□□□ 1
SDF4-206ENST00000478938 TGFBR1P36897 503 aa21.32■■□□□ 1
SDF4-206ENST00000478938 MAGEA12P43365 314 aa21.32■■□□□ 1
SDF4-206ENST00000478938 GJA9P57773 515 aa21.32■■□□□ 1
SDF4-206ENST00000478938 NCS1P62166 190 aa21.32■■□□□ 1
SDF4-206ENST00000478938 FSTL4Q6MZW2 842 aa21.32■■□□□ 1
SDF4-206ENST00000478938 C8orf82Q6P1X6 216 aaPredicted RBP21.32■■□□□ 1
SDF4-206ENST00000478938 CLEC14AQ86T13 490 aa21.32■■□□□ 1
SDF4-206ENST00000478938 AQP12AQ8IXF9 295 aa21.32■■□□□ 1
SDF4-206ENST00000478938 KDM1BQ8NB78 822 aa21.32■■□□□ 1
SDF4-206ENST00000478938 IL17RDQ8NFM7 739 aa21.32■■□□□ 1
SDF4-206ENST00000478938 DYNC2LI1Q8TCX1 351 aa21.32■■□□□ 1
SDF4-206ENST00000478938 DCAF4Q8WV16 495 aa21.32■■□□□ 1
SDF4-206ENST00000478938 KCTD14Q9BQ13 255 aaPredicted RBP21.32■■□□□ 1
SDF4-206ENST00000478938 CCDC90BQ9GZT6 254 aa21.32■■□□□ 1
SDF4-206ENST00000478938 KMT5AQ9NQR1 393 aa21.32■■□□□ 1
SDF4-206ENST00000478938 POLR1CO15160 346 aaPredicted RBP21.32■■□□□ 1
SDF4-206ENST00000478938 SSX4O60224 188 aa21.32■■□□□ 1
SDF4-206ENST00000478938 MTHFD1P11586 935 aaKnown RBP21.32■■□□□ 1
SDF4-206ENST00000478938 POLR2CP19387 275 aaPredicted RBP21.32■■□□□ 1
SDF4-206ENST00000478938 TPSB2P20231 275 aa21.32■■□□□ 1
SDF4-206ENST00000478938 M6PRP20645 277 aa21.32■■□□□ 1
SDF4-206ENST00000478938 RFC2P35250 354 aa21.32■■□□□ 1
SDF4-206ENST00000478938 HADHAP40939 763 aa21.32■■□□□ 1
SDF4-206ENST00000478938 BCAR1P56945 870 aa21.32■■□□□ 1
SDF4-206ENST00000478938 YBX1P67809 324 aaKnown RBP21.32■■□□□ 1
SDF4-206ENST00000478938 TPSAB1Q15661 275 aa21.32■■□□□ 1
SDF4-206ENST00000478938 CYP51A1Q16850 503 aa21.32■■□□□ 1
SDF4-206ENST00000478938 Q5BKY6 102 aa21.32■■□□□ 1
SDF4-206ENST00000478938 CCNYL1Q8N7R7 359 aa21.32■■□□□ 1
SDF4-206ENST00000478938 ANKRD52Q8NB46 1076 aa21.32■■□□□ 1
SDF4-206ENST00000478938 TRPV3Q8NET8 790 aa21.32■■□□□ 1
SDF4-206ENST00000478938 RNF157Q96PX1 679 aa21.32■■□□□ 1
SDF4-206ENST00000478938 TARS2Q9BW92 718 aaKnown RBP21.32■■□□□ 1
SDF4-206ENST00000478938 IDI2Q9BXS1 227 aa21.32■■□□□ 1
SDF4-206ENST00000478938 IL22Q9GZX6 179 aa21.32■■□□□ 1
SDF4-206ENST00000478938 UBA2Q9UBT2 640 aaPredicted RBP21.32■■□□□ 1
SDF4-206ENST00000478938 ZNF541Q9H0D2 1346 aa21.31■■□□□ 1
SDF4-206ENST00000478938 CENPXA8MT69 81 aa21.31■■□□□ 1
SDF4-206ENST00000478938 NRP2O60462 931 aa21.31■■□□□ 1
SDF4-206ENST00000478938 NDST3O95803 873 aa21.31■■□□□ 1
SDF4-206ENST00000478938 CD4P01730 458 aa21.31■■□□□ 1
SDF4-206ENST00000478938 C2P06681 752 aa21.31■■□□□ 1
SDF4-206ENST00000478938 NAGAP17050 411 aa21.31■■□□□ 1
SDF4-206ENST00000478938 YWHABP31946 246 aaKnown RBP21.31■■□□□ 1
SDF4-206ENST00000478938 MAPRE2Q15555 327 aa21.31■■□□□ 1
SDF4-206ENST00000478938 MEP1AQ16819 746 aa21.31■■□□□ 1
SDF4-206ENST00000478938 FAM45BPQ6NSW5 357 aa21.31■■□□□ 1
SDF4-206ENST00000478938 ERO1BQ86YB8 467 aa21.31■■□□□ 1
SDF4-206ENST00000478938 SLC7A14Q8TBB6 771 aa21.31■■□□□ 1
SDF4-206ENST00000478938 FAM45AQ8TCE6 357 aa21.31■■□□□ 1
SDF4-206ENST00000478938 CHAC2Q8WUX2 184 aa21.31■■□□□ 1
SDF4-206ENST00000478938 CEP41Q9BYV8 373 aa21.31■■□□□ 1
SDF4-206ENST00000478938 TRIM15Q9C019 465 aa21.31■■□□□ 1
SDF4-206ENST00000478938 TASP1Q9H6P5 420 aa21.31■■□□□ 1
SDF4-206ENST00000478938 NARFLQ9H6Q4 476 aa21.31■■□□□ 1
SDF4-206ENST00000478938 LOC102724428A0A0B4J2F2 783 aa21.31■■□□□ 1
SDF4-206ENST00000478938 C12orf71A8MTZ7 269 aa21.31■■□□□ 1
SDF4-206ENST00000478938 PDZK1P1A8MUH7 402 aa21.31■■□□□ 1
SDF4-206ENST00000478938 SLCO1B7G3V0H7 640 aa21.31■■□□□ 1
SDF4-206ENST00000478938 H0YAE9 185 aa21.31■■□□□ 1
SDF4-206ENST00000478938 INPP4BO15327 924 aa21.31■■□□□ 1
SDF4-206ENST00000478938 SBK3P0C264 359 aa21.31■■□□□ 1
SDF4-206ENST00000478938 HK2P52789 917 aa21.31■■□□□ 1
SDF4-206ENST00000478938 SIK1P57059 783 aa21.31■■□□□ 1
SDF4-206ENST00000478938 BNIP2Q12982 314 aa21.31■■□□□ 1
SDF4-206ENST00000478938 DMP1Q13316 513 aaPredicted RBP21.31■■□□□ 1
SDF4-206ENST00000478938 PYCR3Q53H96 274 aa21.31■■□□□ 1
SDF4-206ENST00000478938 BRMS1LQ5PSV4 323 aa21.31■■□□□ 1
SDF4-206ENST00000478938 ZYG11AQ6WRX3 759 aa21.31■■□□□ 1
SDF4-206ENST00000478938 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.31■■□□□ 1
SDF4-206ENST00000478938 TRIM63Q969Q1 353 aa21.31■■□□□ 1
SDF4-206ENST00000478938 MKRN2Q9H000 416 aaKnown RBP21.31■■□□□ 1
SDF4-206ENST00000478938 PNMA8BQ9ULN7 279 aaPredicted RBP21.31■■□□□ 1
SDF4-206ENST00000478938 SNTNA6NMZ2 147 aa21.3■■□□□ 1
SDF4-206ENST00000478938 PTTG1O95997 202 aa21.3■■□□□ 1
SDF4-206ENST00000478938 CAPN1P07384 714 aa21.3■■□□□ 1
SDF4-206ENST00000478938 CTRB1P17538 263 aa21.3■■□□□ 1
SDF4-206ENST00000478938 AGXTP21549 392 aa21.3■■□□□ 1
SDF4-206ENST00000478938 RRM2P31350 389 aa21.3■■□□□ 1
SDF4-206ENST00000478938 HTR2BP41595 481 aa21.3■■□□□ 1
SDF4-206ENST00000478938 SPP2Q13103 211 aa21.3■■□□□ 1
SDF4-206ENST00000478938 UGCGQ16739 394 aa21.3■■□□□ 1
SDF4-206ENST00000478938 DUSP7Q16829 419 aa21.3■■□□□ 1
SDF4-206ENST00000478938 RBM48Q5RL73 367 aaKnown RBP21.3■■□□□ 1
SDF4-206ENST00000478938 CTRB2Q6GPI1 263 aa21.3■■□□□ 1
SDF4-206ENST00000478938 TRAF7Q6Q0C0 670 aa21.3■■□□□ 1
SDF4-206ENST00000478938 GDPD3Q7L5L3 318 aa21.3■■□□□ 1
SDF4-206ENST00000478938 STRADAQ7RTN6 431 aa21.3■■□□□ 1
SDF4-206ENST00000478938 THAP5Q7Z6K1 395 aa21.3■■□□□ 1
SDF4-206ENST00000478938 STRA8Q7Z7C7 330 aa21.3■■□□□ 1
SDF4-206ENST00000478938 ARNTL2Q8WYA1 636 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms