RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TSPAN3O60637 253 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 KLHL2O95198 593 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 IGSF6O95976 241 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 DLDP09622 509 aaKnown RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 MYL2P10916 166 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 RALBP11234 206 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 SLC1A2P43004 574 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 SCTRP47872 440 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 RHOAP61586 193 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 MLLT1Q03111 559 aaPredicted RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 PPARDQ03181 441 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 RAD51Q06609 339 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 BST1Q10588 318 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 TYSND1Q2T9J0 566 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 ARMC12Q5T9G4 340 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 ZDHHC20Q5W0Z9 365 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 MBLAC2Q68D91 279 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 CGB2Q6NT52 195 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 ZYG11AQ6WRX3 759 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 CERS6Q6ZMG9 384 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 CMTM8Q8IZV2 173 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 STK40Q8N2I9 435 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 EFHBQ8N7U6 833 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 OR6Y1Q8NGX8 325 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 OR6P1Q8NGX9 317 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 OR4L1Q8NH43 312 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 PIWIL2Q8TC59 973 aaKnown RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 MICAL1Q8TDZ2 1067 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 HDAC10Q969S8 669 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.97□□□□□ -1.13
VMA21-203ENST00000477649 RMDN1Q96DB5 314 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 ALG14Q96F25 216 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 ZNF778Q96MU6 729 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 MRPL57Q9BQC6 102 aaKnown RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 CORO1BQ9BR76 489 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 SLC46A2Q9BY10 475 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 MRPL46Q9H2W6 279 aaKnown RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 MAGEE1Q9HCI5 957 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 NPHS2Q9NP85 383 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 CATSPERZQ9NTU4 200 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 ABCB8Q9NUT2 735 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 TMEM216Q9P0N5 145 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 VPS51Q9UID3 782 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 EMCNQ9ULC0 261 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 APOBEC2Q9Y235 224 aaKnown RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 VWA7Q9Y334 891 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 RAI2Q9Y5P3 530 aa7.97□□□□□ -1.13
VMA21-203ENST00000477649 NYNRINQ9P2P1 1898 aaKnown RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 MYO18AQ92614 2054 aaKnown RBP7.97□□□□□ -1.13
VMA21-203ENST00000477649 NUP205Q92621 2012 aa7.96□□□□□ -1.13
VMA21-203ENST00000477649 A0A1W2PRU2 124 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 LINC01553A4QN01 128 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 F8W8V4 182 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 GRM6O15303 877 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CD3EAPO15446 510 aaKnown RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 FZD6O60353 706 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 UNC5CO95185 931 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 S1PR4O95977 384 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 GSRP00390 522 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 PYGLP06737 847 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 LTA4HP09960 611 aaKnown RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 SLC35E2BP0CK96 405 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 FGF3P11487 239 aaPredicted RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 GABRB3P28472 473 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 PMLP29590 882 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CSKP41240 450 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 SLC1A6P48664 564 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 TTPAP49638 278 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 SUOXP51687 545 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 ZNF140P52738 457 aaPredicted RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 ADARP55265 1226 aaKnown RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 DNAJB13P59910 316 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 ERVFC1P60507 584 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 ABCE1P61221 599 aaKnown RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 SNRPD1P62314 119 aaKnown RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 CYP4F8P98187 520 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 ZBTB16Q05516 673 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CTBP1Q13363 440 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 KRT72Q14CN4 511 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 PCLAFQ15004 111 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 ACAP2Q15057 778 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 PLEKHG6Q3KR16 790 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 FAM182AQ5T1J6 154 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 GPR158Q5T848 1215 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 LYPLAL1Q5VWZ2 237 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 LIPMQ5VYY2 423 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 PLPP4Q5VZY2 271 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 PIWIL4Q7Z3Z4 852 aaKnown RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 GLT6D1Q7Z4J2 308 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CMC1Q7Z7K0 106 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 SLC22A9Q8IVM8 553 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 DENND6AQ8IWF6 608 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 HS6ST3Q8IZP7 471 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 AFAP1L2Q8N4X5 818 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.96□□□□□ -1.14
VMA21-203ENST00000477649 PCDH20Q8N6Y1 951 aaKnown RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 ANKK1Q8NFD2 765 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 OR52K2Q8NGK3 314 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms