RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 RYBPQ8N488 228 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 TMEM145Q8NBT3 493 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 RNF214Q8ND24 703 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 OR2A12Q8NGT7 310 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 MAPK15Q8TD08 544 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 NAT6Q93015 286 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 ISG20Q96AZ6 181 aaKnown RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 LENG8Q96PV6 779 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 PPARGC1AQ9UBK2 798 aaKnown RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 SPASTQ9UBP0 616 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 VPS51Q9UID3 782 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 SARDHQ9UL12 918 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 OR51B4Q9Y5P0 310 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 TDRD6O60522 2096 aaKnown RBP7.38□□□□□ -1.23
BRCA1-214ENST00000477152 KNL1Q8NG31 2342 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 ATRXP46100 2492 aa7.38□□□□□ -1.23
BRCA1-214ENST00000477152 TRPM6Q9BX84 2022 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ANKRD62A6NC57 917 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 TMEM110-MUSTN1A8MSY1 372 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 TPP1O14773 563 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 WNT9AO14904 365 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 FFAR2O15552 330 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 OPA1O60313 960 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 SRGAP2O75044 1071 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 CALCAP01258 141 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ERBB2P04626 1255 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 NME1P15531 152 aaKnown RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 XPAP23025 273 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 GABRB2P47870 512 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 LSSP48449 732 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 MAPKAPK2P49137 400 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 SERPINH1P50454 418 aaKnown RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 SUOXP51687 545 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 CCDC173Q0VFZ6 552 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 RAPGEF1Q13905 1077 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 GRM3Q14832 879 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 NR0B2Q15466 257 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 TAF5Q15542 800 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 POM121L1PQ3SYA9 428 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 PRRT3Q5FWE3 981 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 CT47A1Q5JQC4 288 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 HP1BP3Q5SSJ5 553 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ESRP1Q6NXG1 681 aaKnown RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 C6orf15Q6UXA7 325 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 Q6ZSR6 202 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 TMC6Q7Z403 805 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ABI3BPQ7Z7G0 1075 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ZNF605Q86T29 641 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 JAZF1Q86VZ6 243 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 SDR16C5Q8N3Y7 309 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ARL14Q8N4G2 192 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 KCNE4Q8WWG9 221 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 CASKIN2Q8WXE0 1202 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 TBATAQ96M53 351 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 POLR1BQ9H9Y6 1135 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 BAHCC1Q9P281 2608 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 DOCK4Q8N1I0 1966 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 IGLV3-10A0A075B6K4 115 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 BECN2A8MW95 431 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 FANCGO15287 622 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ZW10O43264 779 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 LEFTY1O75610 366 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 TCEA3O75764 348 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 GJB6O95452 261 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 POP4O95707 220 aaKnown RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 CSF2P04141 144 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ANXA6P08133 673 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 ADRB3P13945 408 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 GLB1P16278 677 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 PRLRP16471 622 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 RRM1P23921 792 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 CDH5P33151 784 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 UBE2HP62256 183 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 YPEL5P62699 121 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 CXADRP78310 365 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 GABREP78334 506 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 PITX1P78337 314 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 GNA12Q03113 381 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 SYCP1Q15431 976 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 VWA3BQ502W6 1294 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 TRIM72Q6ZMU5 477 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 UNC5AQ6ZN44 842 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 MARCH9Q86YJ5 346 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 MCATQ8IVS2 390 aaKnown RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 FAM71AQ8IYT1 594 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 SLC25A45Q8N413 288 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 WDTC1Q8N5D0 677 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 BEND7Q8N7W2 519 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-214ENST00000477152 FAM13CQ8NE31 585 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 OR6C4Q8NGE1 309 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 IFI44Q8TCB0 444 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 KLK6Q92876 244 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 APOLD1Q96LR9 279 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 MYOCQ99972 504 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 SLC13A1Q9BZW2 595 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 MAGEH1Q9H213 219 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 NDST4Q9H3R1 872 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 PIGVQ9NUD9 493 aa7.37□□□□□ -1.23
BRCA1-214ENST00000477152 FRYQ5TBA9 3013 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 SPTY2D1-AS1A0A0U1RR47 76 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms