RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 GOLGA8SH3BPF8 625 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 PIGNO95427 931 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 PON1P27169 355 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 ADRA1BP35368 520 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 LIG3P49916 1009 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 KIAA1024LP59773 190 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 ATP11AP98196 1134 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 UGP2Q16851 508 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 EXOC3L4Q17RC7 722 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 SMYD5Q6GMV2 418 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 CACNA2D3Q8IZS8 1091 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 C9orf43Q8TAL5 461 aaPredicted RBP16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 FUBP1Q96AE4 644 aaKnown RBP16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 CATSPER2Q96P56 530 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 MAGEB5Q9BZ81 275 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 SIX2Q9NPC8 291 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 PLAAQ9Y263 795 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 B3GALT1Q9Y5Z6 326 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 LRRK1Q38SD2 2015 aa16.55■□□□□ 0.24
APOBEC3F-203ENST00000476513 TSPAN11A1L157 253 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 ZNF891A8MT65 544 aaPredicted RBP16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 CACNB4O00305 520 aaPredicted RBP16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 LRIG2O94898 1065 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 ALDH4A1P30038 563 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 MAZP56270 477 aaKnown RBP16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 PAK1Q13153 545 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 ZNF438Q7Z4V0 828 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 C17orf82Q86X59 251 aaPredicted RBP16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 KIAA1524Q8TCG1 905 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 HCAR2Q8TDS4 363 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 CASKIN2Q8WXE0 1202 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 ART4Q93070 314 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 CCDC74BQ96LY2 380 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 KLC2Q9H0B6 622 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 PDCL3Q9H2J4 239 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 NOL6Q9H6R4 1146 aaKnown RBP16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 DNAJC12Q9UKB3 198 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 DAAM1Q9Y4D1 1078 aa16.54■□□□□ 0.24
APOBEC3F-203ENST00000476513 SPTBN1Q01082 2364 aaKnown RBP16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 CHD5Q8TDI0 1954 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 GOLGA6L4A6NEF3 574 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 TNFRSF10CO14798 259 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 NKX2-8O15522 239 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 CD1CP29017 333 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 MMP12P39900 470 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 NR1D2Q14995 579 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 CLPPQ16740 277 aaPredicted RBP16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 INO80DQ53TQ3 878 aaPredicted RBP16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 HIST2H2BCQ6DN03 193 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 ERAP2Q6P179 960 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 ARCQ7LC44 396 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 ZNF354CQ86Y25 554 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 FAM71AQ8IYT1 594 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 EMC1Q8N766 993 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 TBC1D31Q96DN5 1066 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 EXOC2Q96KP1 924 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 NCAPGQ9BPX3 1015 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 DDA1Q9BW61 102 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 SUV39H2Q9H5I1 410 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 CYP4F12Q9HCS2 524 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 SPATS2LQ9NUQ6 558 aaKnown RBP16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 LHX3Q9UBR4 397 aa16.53■□□□□ 0.24
APOBEC3F-203ENST00000476513 RHPN2P1A8MT19 583 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 BIN1O00499 593 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 RAD1O60671 282 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 PRKCGP05129 697 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 KELP23276 732 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 LIMK2P53671 638 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 BPIFB4P59827 614 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 TRA2AQ13595 282 aaKnown RBP eCLIP16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 CDO1Q16878 200 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 CREBRFQ8IUR6 639 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 AGBL5Q8NDL9 886 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 MIB2Q96AX9 1013 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 SLC45A3Q96JT2 553 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 LGR4Q9BXB1 951 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 LRRC4CQ9HCJ2 640 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 MOSPD1Q9UJG1 213 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 ATP8A1Q9Y2Q0 1164 aa16.52■□□□□ 0.24
APOBEC3F-203ENST00000476513 UNC79Q9P2D8 2635 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 NBPF19A0A087WUL8 3843 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 GTPBP10A4D1E9 387 aaKnown RBP16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 DUX1O43812 170 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 RECQL5O94762 991 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 FGFR1OPO95684 399 aaKnown RBP16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 FGF1P05230 155 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 PLEKP08567 350 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 HOXC4P09017 264 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 PRKAR1AP10644 381 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 TRIM23P36406 574 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 CYTH1Q15438 398 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 C15orf59Q2T9L4 293 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 TAF3Q5VWG9 929 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 BRAT1Q6PJG6 821 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 ZSWIM9Q86XI8 627 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 NRROSQ86YC3 692 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 ELOA2Q8IYF1 753 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 CCDC112Q8NEF3 446 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 ZDHHC1Q8WTX9 485 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 ABHD17AQ96GS6 310 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms